| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1188 |
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| Symbol | |
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| ID | 4017673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1379362 |
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| End bp | 1381299 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955178 |
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| Product | hypothetical protein |
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| Protein accession | YP_562197 |
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| Protein GI | 91792546 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000309413 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCTA ACTCCTATTC ATATCAGCTT TTATTCAGTG CAATGCTACT GCTCAGTGCA
TGTGGTGGTG GCTCGGATGA TAGCGCATCT GAACCAAATT CTGCCCCCAT CACCCCGCAG
CCAACAGCCC AGGCTCCTGT AGTGAATGTC ATTCCGCTGG CAAGCCCAGC TCGCCAAGGT
ACGGCGATTA CCATCAGCGT TACGGCAAGC GATGCCGATG GCATCAAGAG TTACTTATGG
CAACAAATTG CAGGACCAAG CCTTGTTTTG AGCAAGACAG ATGAAGCGAG TTTAACCTTC
ACCCCAGTGG TGACTGATGT CATTCGCTCA GATCAGTACA GTTTCAGGGT GCAAGTGACA
GATAATCAAG GCAATAGCAC CAATGCTGAT ATTGACGTAG AAGCCAAGCG CGCCATGACA
GATAAACAAG CGGGACGTTT ATTGCATCAA GCCACATTAG GCCCCACTAG TGCTGACTTA
AATCACGCCA CCGGCATTAG TGAACACGAA TGGATAGCCC AGCAGATAGC CCTGCCCGCT
AGCCTACATT CGCCTTTGTT AGAAAACTAC CCTGGCAAGG ATGCCCCCGC GCAAATTAAT
CGTCTCGATG CCTGGTGGAA AGCCTCACTC ACGGCGCCGG ATCAATTGCG TCAGCGCGTG
GCGTTCGCCT TAAGTGAAAT TTTTGTGGTC TCAGATGCGA ACAACGCCTT GAAGAGTGAG
CCTGAGGGCA TGACAGGCTA TTATGATTTA CTGCTTCAGC ACGCCTTTGG CAATTACCGC
GATTTACTCG AGGCGGTGAC CTTGTCCCCT GTGATGGGCA GTTATTTAAG CCATTTAGGC
AATGAAAAAG CCAATACAGA ACTCAATATA CGCCCCGATG AAAACTTTGC TCGCGAGGTC
ATGCAGCTCT TCACCATAGG CCTTAAGCAA TTAAATCTCG ACGGTAGCCC AATACTGTCA
AGCACAGGTG AGCCAATAGC CAGCTACAGC CAAACAGAAA TAGAAGGCTT TGCCCATGTG
TTTACCGGCT GGACGTTTGC CGCCAGTGCC CGTTGGAATA GACCCAGCCG TAATTTCGTT
CTGCCCATGG AGCCTTGGGA GGATTTTCAT TCCCAAGAAG AAAAAAGTTT ACTGAATGGA
ACTGTCCTTG CGGGCGGGCA AGCGGCCAAA CAAGATTTAA CCCAAGCCTT AGATAATCTG
TTTGACCACC CCAATGTGGG GCCTTTTATC GGTCAGCAGC TTATTCAACG TTTAGTCACC
TCAAACCCTA GCCCGCAATA TATTCAAAGA ATTGCCCAGG TATTTAATGA TAACGGTCAA
GGTGTTCGCG GTGATTTGGG CGCCACCATT AGCGCTATCT TGCTCGATGA TGAGGCCCGT
CAGACCATTG GAAGCTTGCA ATATTTTGGT AAAATTCGTG AGCCTTTACT GCGTACAACC
CACCTGTGGC GCGAGCTTAA CGCAGCAAGC CCCAGTGGAC GTTACTTTAC TTGGTCCTTA
GATGACAGCC ACGGTCAGAC GCCGTTAGGC TCACCTTCAG TGTTCAACTT CTTTAGGCCC
GATTATCAAA GTGCCGATCT CCTGCCGTTA GATTTAGTCG CCCCAGAGCT TCAAATCGCC
AATGACGCTG CCTTGATTGG CCAATTCAAC AGCCAATACG GTGGGCTTGT GTGGAACATC
AAGGAGCTGA GTCAAAATCC TAGCGAAAAT CGCATTATGG TAAGCCTGCA AACTCACGTG
GATATCTTGC AGCAACAGGG GCTTGAAGCA CTGCTCAACC ACTATGACAG GGTGTATTTC
AGCTCCTCTA TGACGGCGGA GTTCAAGGAG CGTTTAAGGC AAATCCACGA TATTTGGAAA
TCATCATCTC AGTATCAACA AGTGGCTTAC CTCTTGTTTA CCATTACGAT TTCACCCGAT
TATCTAGTGC AGTACTAA
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| Protein sequence | MASNSYSYQL LFSAMLLLSA CGGGSDDSAS EPNSAPITPQ PTAQAPVVNV IPLASPARQG
TAITISVTAS DADGIKSYLW QQIAGPSLVL SKTDEASLTF TPVVTDVIRS DQYSFRVQVT
DNQGNSTNAD IDVEAKRAMT DKQAGRLLHQ ATLGPTSADL NHATGISEHE WIAQQIALPA
SLHSPLLENY PGKDAPAQIN RLDAWWKASL TAPDQLRQRV AFALSEIFVV SDANNALKSE
PEGMTGYYDL LLQHAFGNYR DLLEAVTLSP VMGSYLSHLG NEKANTELNI RPDENFAREV
MQLFTIGLKQ LNLDGSPILS STGEPIASYS QTEIEGFAHV FTGWTFAASA RWNRPSRNFV
LPMEPWEDFH SQEEKSLLNG TVLAGGQAAK QDLTQALDNL FDHPNVGPFI GQQLIQRLVT
SNPSPQYIQR IAQVFNDNGQ GVRGDLGATI SAILLDDEAR QTIGSLQYFG KIREPLLRTT
HLWRELNAAS PSGRYFTWSL DDSHGQTPLG SPSVFNFFRP DYQSADLLPL DLVAPELQIA
NDAALIGQFN SQYGGLVWNI KELSQNPSEN RIMVSLQTHV DILQQQGLEA LLNHYDRVYF
SSSMTAEFKE RLRQIHDIWK SSSQYQQVAY LLFTITISPD YLVQY
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