Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1168 |
Symbol | |
ID | 4017692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1343878 |
End bp | 1345578 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637955158 |
Product | radical SAM family protein |
Protein accession | YP_562177 |
Protein GI | 91792526 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAC AAAATAACGA TACCATTCCT ATCAGAATAC TCCAGCAAAC TGCGCTTGAA ATTAATGTAC CTCAGAACAG CTCGCTTAGA GAATATTTAG GCACAAAAGA TGAAACCTCC AGAACACCCT GTGCTCGGAA ACCACCTAAA TATGAAGTTT ACAATCAAGG TTATTCTGCG CCACCTAAAG TGTTACTGGT ATTGCCTCCT ATGTGTATGT ATGAAGGCGC AGTTAAGCGA CTCATTCCGC CTTTAGGTCT TTGCTATATC GCTGCCAATA TGCTCAAACA TGGCTATGAA GTTGATATTC TGGACTGCAT TGCTGAAGGT TATGAAACAG AAACATTAAT TGCACCTAAT ATTTACCGTC TGGGCATTAC CGAGGAGGAA TTCGCTGAAC GTATTGAAAG TAGCGATCAT GATGTAATTT GTTTTTCGAT GATATATTCA TCTGATATAG AGAATCTGTA CCGCTACGCA AAAATTGTTA AGCAGGTGGC AAAGGACAAA GTGGTCATGG CTGGAGGAAT GCATGCCTCT ATTTATCCGG AACAATTCAT TCGGGATGCA GGACAATGGG ATGATCAACC AGTTATTGAT TTTGTTATTC GTGGAGAAGG TGAATTTCGT CTCATTCACT TTATTGAAAA CCTTCAACAG GGAAGGTTCG ATATCCATGC TGACGGACTA GTAGGCTGGC ATGATGGGGA CGTTTTTATT AATCCTCAGT ATACCCAGAT TCAAGATCTG AATGACCTGC CTTTTCCTGC ATATCATAAG CTTCCACTGG AAAAATATTT TCATCACAAC GTACCATTTT CACCTTACCC TCGCGGTAAT CGGGTTATGC AAATATATAC CTCTCGTGGC TGTCCTATTG GCTGTACTTT TTGTTCAAGT ACAAACTTCA ATAAAGCCTA TCGGAGTCGA AGTGTTGAAA ATGTTATAGA GGAAATCAAA TTCTATCAGC GTGAATACGG CATTGATGAG ATTCAGTTTG CAGATGACAA TTTAACCTTT GATAAGAAGC GATCAATTAA ACTTTTTAAT GAGCTCGAAA AACTCAATAT TCAGTGGTGT ACTCCAAACG GAATTATGAT AAACACCCTT GATGAACAAG TACTTGATGC CATGATTCGT TCGGGTCTTT ATCAAATAAC CCTCTCACTG GATAGTGGGA ATGCCGATAC TTTGAGAGAA AAACACCGCA AGCCAGTAAA ACTCCAACGT GTGCCAGTCT TGATGGATTA TTTGAAAAAA CGAGGGGTAC TCATGCACGG GACTCTGGTG GTCGGAATGC CGGGGGAAAC GGTAGAGGAT ATCGAGAAGG GGTTCCGTTA TGTGGAGACA TTACCATTTA ATTCAATGAA TGTTTTTATT GCTCAGGCTC TTCCCGGTTC AGAGCTGTTT GAGGTGTCAT TACAAAACGG CGCTATCACC TATGAAACTT CACTCTATAT TGATACTGCG CAATCGACAT TAAAGCTAAC AGATATTGAT GGAAAAGTGT TGGAAGCGTT AGTGGAAAAT TTTCTTAGTG CCTACAATCG AAAAATATAT CAACGGGATA CTGAGACCTG GAATAAAAAG TATCAGGATC ACCAAAAACG AATGGCAAAG ATCTGCATAG GAAAAGCATC TGCCAATACT TCAGCCATTA TTGAGGCATC AAATGAATCA AAAGAAAGTG AATGGGCTTA G
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Protein sequence | MKEQNNDTIP IRILQQTALE INVPQNSSLR EYLGTKDETS RTPCARKPPK YEVYNQGYSA PPKVLLVLPP MCMYEGAVKR LIPPLGLCYI AANMLKHGYE VDILDCIAEG YETETLIAPN IYRLGITEEE FAERIESSDH DVICFSMIYS SDIENLYRYA KIVKQVAKDK VVMAGGMHAS IYPEQFIRDA GQWDDQPVID FVIRGEGEFR LIHFIENLQQ GRFDIHADGL VGWHDGDVFI NPQYTQIQDL NDLPFPAYHK LPLEKYFHHN VPFSPYPRGN RVMQIYTSRG CPIGCTFCSS TNFNKAYRSR SVENVIEEIK FYQREYGIDE IQFADDNLTF DKKRSIKLFN ELEKLNIQWC TPNGIMINTL DEQVLDAMIR SGLYQITLSL DSGNADTLRE KHRKPVKLQR VPVLMDYLKK RGVLMHGTLV VGMPGETVED IEKGFRYVET LPFNSMNVFI AQALPGSELF EVSLQNGAIT YETSLYIDTA QSTLKLTDID GKVLEALVEN FLSAYNRKIY QRDTETWNKK YQDHQKRMAK ICIGKASANT SAIIEASNES KESEWA
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