Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1164 |
Symbol | |
ID | 4017688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1340391 |
End bp | 1341275 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637955154 |
Product | sugar nucleotidyltransferases-like protein |
Protein accession | YP_562173 |
Protein GI | 91792522 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1213] Predicted sugar nucleotidyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAAACT ACGATAATAG TAACGATAAT AGCCAGAGTA AAAGAGGCGA GCTAAGCGTA AGGAATTCTG ACACTATTGC TATCATATTG CTTGCTGGCA TTGGGCGCAG GATGCAACAT GAATTACCCA AATCACTGAT TCCTTTTGAA ATTAATGGAG AGGAAGTTAC TTTTATAGAG CGGCTTTTAC ATGTTCTTGG TAAAGCCGGC GTTAGTCATT TTATACTGGT CGTTAATTCT CATAACTTTG CATACTTTAA GCACTTGGAA AGCTCTTATA TTTCGCTGGT CGTGAATCAA AGTGATGTGT CTTCAACAGG GTCTTCACTG AGTTTAAATT ATGGGTTAGA CAAATTGCGA GCCAGTGTCT CAAAAGAGAT GCCACATCTC CTTATTATGG ATGGCGACAT TATTTTTGAG CAACGATTAG CCAATTTTGT CGTCGATTTT AATGCAGGCT CAGCCCTATT TGTTACACCC AATATTTCAG AGGATGAAGA AGAAGTTAGG GTGTATCTCC AAAATCAACA ACCCAAATTA ATTGGTAAAG GTATTACGAG CGAAATATCA AAAAACTTGT ATCTGGCAGG TGAAAGCTTA GGCATCATTA AATTGTGCCC TGATGATCTC CCTCTCTTAC ATAGCCTTAC AACCTGGTTA TGTGGTTCTC CTTCAAATCC GAAAGCATTT GGTTATGCCC GACAAAAATC GGAGCATGAA GAAATTTGGC AGTATTTTTT TAATTTAGAA CGACTTATTG TTGTATCTGT GGCGAAAGAT CTGGTTTTTT CTGAATGTGA TAGCCTTGAA GACAGAGAAC ATATTAACGA GGTCGTGTTG CCGAAAATTT TAGTTAACGA TAAACGGATC TTTGCACACT CATGA
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Protein sequence | MQNYDNSNDN SQSKRGELSV RNSDTIAIIL LAGIGRRMQH ELPKSLIPFE INGEEVTFIE RLLHVLGKAG VSHFILVVNS HNFAYFKHLE SSYISLVVNQ SDVSSTGSSL SLNYGLDKLR ASVSKEMPHL LIMDGDIIFE QRLANFVVDF NAGSALFVTP NISEDEEEVR VYLQNQQPKL IGKGITSEIS KNLYLAGESL GIIKLCPDDL PLLHSLTTWL CGSPSNPKAF GYARQKSEHE EIWQYFFNLE RLIVVSVAKD LVFSECDSLE DREHINEVVL PKILVNDKRI FAHS
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