| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1131 |
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| Symbol | |
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| ID | 4017413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1299208 |
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| End bp | 1300167 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637955122 |
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| Product | integron integrase |
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| Protein accession | YP_562141 |
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| Protein GI | 91792490 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCAAT TAACATTTTT GGAGGCTATA CGGACAGAGA TCAGGGTACG CCATTACAGC
TATCAAACAG AAAAATCCTA CCTCTATTGG AACCGCTATT TCATTCGACA TTGCAATATT
CGTCATGGCG CTGATATAAC CCCCGCTTTG ATTGAACAAT TTCTCTGTTT TTTAGCAGTG
GAGTGCGAAG TGTCGGCGAG CACCCAGAAA CAGGCCCTAT GTGCCATTGT ATTTGCTTGT
CGCCATGTGT TAAAAATTGA GCCCAATGAG TTACAATTTC CCTATGCAAA AGCCCCTAAA
CGAATACCGC AGGTATTGTC TAACGAAGAA GCAAAACTGA TCATCAGCAA TTTGTCAGGC
TACCACTATT TAATTGGTGC CATCCTATTT GGCTCAGGGC TAAGATTAAA GGAAGCCTTA
AAACTTAGGG TAAAAGATAT TGATCTAACC ACTAAATCTA TCTTTGTGTA CCGAGGTAAA
GGGCAAAAAG ATCGAGTTTG TATGCTACCT AACGGATTGA TTGATGTTCT AAAGTCACAA
ATGAAACAGG TAAAAAAGCT CCACGAGGCG GATTTGTCAG ATGGCTTTGG ACTTGCTTCA
TTGCCCATCT CTCTCATCAG AAAATACCGT AGTAACGCCT CTAAGTTTCA TTGGCAATAT
ATCTTTCCTG CTAGCCGCCG TTGTATGCAC CCAAGTGACA ACTATGTGTG CAGACACCAT
ATTCATCCAA CGGCTTTTTC ACGTGCATTA AGGCAAGCTA CCACTAACTG TGGTATAGAT
AAGCGCGTTA CCGCCCATAC TTTCCGCCAT TCATTTGCAA CATCTTTATT ACTCAAAGGC
CATGACATTC GTACCATCCA AGAGTTATTG GGACACAGTG ATGTCAAAAC AACCGAGATA
TATACCCATG TGATTGGTGG CCATCATACT GGGGTCATAA GTCCTCTTGA CAGTCTTTAA
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| Protein sequence | MGQLTFLEAI RTEIRVRHYS YQTEKSYLYW NRYFIRHCNI RHGADITPAL IEQFLCFLAV
ECEVSASTQK QALCAIVFAC RHVLKIEPNE LQFPYAKAPK RIPQVLSNEE AKLIISNLSG
YHYLIGAILF GSGLRLKEAL KLRVKDIDLT TKSIFVYRGK GQKDRVCMLP NGLIDVLKSQ
MKQVKKLHEA DLSDGFGLAS LPISLIRKYR SNASKFHWQY IFPASRRCMH PSDNYVCRHH
IHPTAFSRAL RQATTNCGID KRVTAHTFRH SFATSLLLKG HDIRTIQELL GHSDVKTTEI
YTHVIGGHHT GVISPLDSL
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