Gene Sden_1130 details

Gene Information

• Locus tag: Sden_1130
• ID: 4017412
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1298217
• End bp: 1298867
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637955121
• Product: NADH dehydrogenase
• Protein accession: YP_562140
• Protein GI: 91792489
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0702] Predicted nucleoside-diphosphate-sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAGA AAACGGCCAT AGTTGTAGGC GCTACAGGCT TGGTTGGTCA ATCTGTGGTT 
GAGCACTTAG TTAATGCTGC GCATATTGAA AAAGTCATTA GCATAACCCG TAGCCCTGTT 
GCTTATTCAT CCGCTAACGT GGTGAATCAT GTCGTTAACT TTGAACGTTT AGCCGCTTAC 
AGCGCTGCTT TTAAGGGGGA TATCTTGTTC TCGTGCCTTG GGACAACGCT TAAGCAAGCA 
GGCTCATTGG CCGCTCAGCG CAAGGTCGAT ATTGATTATC AATTTGAGGC AGCAAAACTT 
GCGCTTAACA ACGGCGTATC CCATTATTTA TTGGTTTCAT CCAGTGGCGC CAATGAAAAA 
AGTCATAGTC CCTATTTAAA AATGAAAGGG GAGTTAGAAG TAAAAATAGG CGCGTTAGGC 
TTTAATCGCA TCAGCATTTT CCAACCCTCA CTATTGCTTG GTGAGCGCAG GCATTTTCGC 
TTAGGTGAAA AAATTGCGGC TTATATTCTC CCAGTGATTT GCAGCATCAG TTTTCTCAGG 
CGTTATCGCC CGATAACAGG CAATGAAGTG GCAAAAAAGA TGGTGTTAGT TAGCCAAGAA 
GCTGGCAAAC GACTGGAGAC ATTTAAATTA GATGAGGTTT TTGTCAAGTA A 

 

Protein sequence

MMKKTAIVVG ATGLVGQSVV EHLVNAAHIE KVISITRSPV AYSSANVVNH VVNFERLAAY 
SAAFKGDILF SCLGTTLKQA GSLAAQRKVD IDYQFEAAKL ALNNGVSHYL LVSSSGANEK 
SHSPYLKMKG ELEVKIGALG FNRISIFQPS LLLGERRHFR LGEKIAAYIL PVICSISFLR 
RYRPITGNEV AKKMVLVSQE AGKRLETFKL DEVFVK