Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1122 |
Symbol | |
ID | 4017404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1289822 |
End bp | 1290790 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955114 |
Product | beta-lactamase-like protein |
Protein accession | YP_562133 |
Protein GI | 91792482 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000282936 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAC TGTCTTTAAG TTTAAGCATC TTGCTCTTGT CGGCCTGTTC TGCTCAGTCA CAGGCCAAGA TAACGGCTAA TGACACTGTG CCCTATCAGT CAGTCCTTGC TAAAACCCAG TGGCACCATG GCGCAGTAGA TTGCGATACG GATAAGTCGG CAAACCTTGA TGTTTATCAG CATGATGAAA ACACCTTTAT CTTACGGCAG AATAAATGCT TAACCTTCGA AGCGCCCTTC ATTTACTTGC TGGTGGGCAG TGAGACTATT CTGGTGTTGG ACTCTGGAGC GCTGGATGAA GCGGAGCATT CTGTCTATAA AGCAATTGAA ACCTTACTAA CAAAACAGCT AGGTAAGGCC GAATTTTCCG CGAGGAATAT GCTGCTTGCC CACAGTCACG GTCATAGGGA TCATTATCGA GGGGATGATT ATTTCAAGGG GCAAACTAAG GTCACTGTCA TAGAGCCAAA CCTTAAGGCG GTGCAAGACT ATTTTGGTTT CGATAATTGG CCCAAAGGGA CTAAGACCTT AGAACTCGGT GGCAGAATGC TGACTGTGAT GGCAACCCCT GGGCATCAAG CGCAGGCCAT TAGTATTTAT GACTCACGAA CTCAATGGTT AATGACTGGT GATACCCTTT ATCCAGGTTT GGTCTATGTG AAAGACTGGC ATGCTTATCG AAGTAGCATA GACAGATTGG CTAGCTTTGC TGCCAATAAT CAAATTGCAG CCATTATGGG GGCTCACATA GAGATGAAGC GTAGTGGGGG CAGTTATTAC CCCATAGGCA GCCAATATCA GCCAGAGGAA GCGGCGCTGG ATCTGAGTGT GTCACACTTA AATGAACTAA ATAAGCAGCT TAAAGAAAAT ACTGATGAAC GGGAGCTAAA TTTGGGCTAT GTCATGATTA AACCCATGGG ATTTTTTCAG AAAACCCTCA CTAATATCGT CACTTGGATC AGCGAATAG
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Protein sequence | MKSLSLSLSI LLLSACSAQS QAKITANDTV PYQSVLAKTQ WHHGAVDCDT DKSANLDVYQ HDENTFILRQ NKCLTFEAPF IYLLVGSETI LVLDSGALDE AEHSVYKAIE TLLTKQLGKA EFSARNMLLA HSHGHRDHYR GDDYFKGQTK VTVIEPNLKA VQDYFGFDNW PKGTKTLELG GRMLTVMATP GHQAQAISIY DSRTQWLMTG DTLYPGLVYV KDWHAYRSSI DRLASFAANN QIAAIMGAHI EMKRSGGSYY PIGSQYQPEE AALDLSVSHL NELNKQLKEN TDERELNLGY VMIKPMGFFQ KTLTNIVTWI SE
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