| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1062 |
|---|
| Symbol | |
|---|
| ID | 4016778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1214002 |
|---|
| End bp | 1214901 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637955054 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_562073 |
|---|
| Protein GI | 91792422 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA GTACCCCCAA TGTTGATTTG AGCGCTAAGC TCTCAAATAG TTTGAGCCTC
ACCACTATTA TTCTCGTCAT GGTTGTTATC TTGGCACTCA TATCCCTATT TGGCAGCTGG
TATACGGTTG ACCAAGGTGA GCGCGGCGTT ATCTTAAGAA ATGGTAAGAT TATCGGCACC
GCAGAGCCAG GGCTTGGTTT CAAACTGCCC ATGTTTGATT CCGTAGTGCG CATATCCACT
CAGACTCACA CCACGAGCTA CCAAGCGCTG CAGGCCTACA GCCGCGATCA GCAGCCAGCC
ACGCTGCGCG CCTCTGTCAC TTTTAGCATT CCCCCTGATA AAGTCGAGGA AGTGTATGCT
AACTTCAAAA GCATAGATTC GATGATAGCG CGTTTACTGG ACCGCCAAGT GCCGACCCAA
GTTGAGAATA TCTTCGGTAA ATACACGGCT ATTTCAGTGG TGCAAGAGCG CATCAAGTTT
GGTATCGATG TCACCGAAGC CATTAAAAAG TCAATCAAGG GGCCGGTAGA TATCACCTCA
GTGCAGATTG AGAATATCGA TTTTTCTAAC GCTTACGAGA AATCAGTGGA AGACAGGATG
CGCGCCGAAG TGGAAGTGCA GACTCAGCTG CAAAACTTAG AAAAAGAGCG GGTGAGTGCG
CAAATTGCCG TGACTCAAGC TCAAGCTGAG GCCGACTCAC AATTAGCCCG TGCTAAAGCC
GAAGCCGAGA GTATTCGCAT CAAGGGTATT GCAGAAGCCA CCGCCATTAA AAGCCGCGCC
GAAGCCCTGG CCCAAAACCA AAATCTTGTG GAGCTCACCA AAGCCGAACG TTGGGACGGT
AAACTGCCCA CCACTATGCT GCCCACAGGC ACACTGCCCT TTATTGATGC TAAAAAATAA
|
|---|
| Protein sequence | MLKSTPNVDL SAKLSNSLSL TTIILVMVVI LALISLFGSW YTVDQGERGV ILRNGKIIGT
AEPGLGFKLP MFDSVVRIST QTHTTSYQAL QAYSRDQQPA TLRASVTFSI PPDKVEEVYA
NFKSIDSMIA RLLDRQVPTQ VENIFGKYTA ISVVQERIKF GIDVTEAIKK SIKGPVDITS
VQIENIDFSN AYEKSVEDRM RAEVEVQTQL QNLEKERVSA QIAVTQAQAE ADSQLARAKA
EAESIRIKGI AEATAIKSRA EALAQNQNLV ELTKAERWDG KLPTTMLPTG TLPFIDAKK
|
|---|
| |