Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0976 |
Symbol | |
ID | 4016746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1117291 |
End bp | 1117722 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954966 |
Product | hypothetical protein |
Protein accession | YP_561987 |
Protein GI | 91792336 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.21333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAG GTACGATTTT ATGGCCAACG GATTTTTCTG ATACGGCGTC CCATGCACTC AGTTATGCCA TCGAAATGGC CAACTTATAT CAAGTTGGGA TCAAAATTTT ACATGTGGTG CCTCAGCCCG TTGGGGACGA GAACTACATG ATTTTATCCA TTAGTCCAGA AGAGTTGGCC CAAAACATGG AACTTGCTGC CGCTAATCGC ATGCAGCAAT TACTCTCTGA ATTAGACACT AACTTAAGCG TTGAAACTCA AATTCGCCGC GGTGATGCGG CCACCGAAAT CATCGCCGAA GCCAATGCGG GCGACGTTGG CATGGTGGTG CTGGCGAGCC ACGGTCGAAC CGGTTTTAGC CACTTTCTCC ATGAGAATGT CGCCGAAGCT GTGGCGAATT TGGCTAAGTG CCCAGTGCTG GTGGTCAAAT AG
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Protein sequence | MRKGTILWPT DFSDTASHAL SYAIEMANLY QVGIKILHVV PQPVGDENYM ILSISPEELA QNMELAAANR MQQLLSELDT NLSVETQIRR GDAATEIIAE ANAGDVGMVV LASHGRTGFS HFLHENVAEA VANLAKCPVL VVK
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