Gene Sden_0863 details

Gene Information

• Locus tag: Sden_0863
• ID: 4017058
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 988430
• End bp: 989104
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637954853
• Product: nitroreductase
• Protein accession: YP_561874
• Protein GI: 91792223
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGAGC AACACCTGCC GTTAACCGAT TTTATTGAAT ATTCACAAGA TGAAATGTTG 
AGTCGCGCCC AAGCCCATTA CACGGAGATT AAACGCCGCC ATTCTATTCG TAATTTTTCT 
GACCGCGCTG TGCCAAAAGA TATTATCGCC CAATGTATTT TAGCCGCCGG CACCGCCCCA 
AATGGCGCCA ATCATCAACC CTGGCACTTT GTTGCCATTA GTCAACCGCA GGTTAAAGCG 
CAAATCCGCC AGCAAGCGGA GGCATTAGAG CAGGCTTTTT ATGGGGGACG AGCGGGGGAG 
GAATGGCTCG ATGCCTTAAA GCCCTTAGGG ACAGATGCGG ATAAAGCCTA CCTTGAACAC 
GCACCTTGGT TAATTGCTGT TTTTAGCCAA AAACGTTTGC AAGAAGCTGG GCAAGAAAAA 
AGTAACTATT ATGTTCATGA ATCGGTAGGG ATAGCCACAG GCTTTCTTAT TCAAGCCCTG 
CACAATGCAG GGCTTGGCAC CTTAACTCAC ACGCCTAAAC CCATGAGTTT TTTGTCAAAA 
ATATGCAAGC GAGATAACGA TAATGAAAGG CCTTATATGC TTATCATTGC CGGATACCCA 
AGCGAGGATG CCACCATTCC AGCTCATGCC GTAAACAAAA AATCCTTAGA TGAAATCTGT 
GATTTTATCG AGTAA 

 

Protein sequence

MKEQHLPLTD FIEYSQDEML SRAQAHYTEI KRRHSIRNFS DRAVPKDIIA QCILAAGTAP 
NGANHQPWHF VAISQPQVKA QIRQQAEALE QAFYGGRAGE EWLDALKPLG TDADKAYLEH 
APWLIAVFSQ KRLQEAGQEK SNYYVHESVG IATGFLIQAL HNAGLGTLTH TPKPMSFLSK 
ICKRDNDNER PYMLIIAGYP SEDATIPAHA VNKKSLDEIC DFIE