Gene Sden_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0857 
Symbol 
ID4017052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp980824 
End bp981153 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content43% 
IMG OID637954847 
ProductIojap-related protein 
Protein accessionYP_561868 
Protein GI91792217 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000112346 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAGCA CGGAATTAAA AGCATTTGTT GTCGATAAAG TCGATGATCT AAAAGCCAAA 
GACGTTGTTG TTTTAGACGT TACCAATCAA TCAAACATTA CCGATTACAT GGTGATCTGC
TCTGGCACAT CAAAAACCCA TGTACGCGCT ATCGCTGAAA ACTTAATTGT TCAAGCAAAA
GCGGCTGGCA TTCAGCCATT AGGCGTTGAA GGCCGTGATA GCAGTGAATG GGTATTAGTA
GATTTAGGCG ATGTGATCCT GCATGTGATG CAAGAAAGCA GCCGTGATTA TTACCAGCTC
GAAAAACTCT GGTCAGAACA CAACGCTTAA
 
Protein sequence
MQSTELKAFV VDKVDDLKAK DVVVLDVTNQ SNITDYMVIC SGTSKTHVRA IAENLIVQAK 
AAGIQPLGVE GRDSSEWVLV DLGDVILHVM QESSRDYYQL EKLWSEHNA