Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0659 |
Symbol | |
ID | 4016936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 759644 |
End bp | 760441 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637954644 |
Product | response regulator receiver |
Protein accession | YP_561672 |
Protein GI | 91792021 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACAA TTTCACCCAA TGATTTATCC ATTTTACTAC TCGAGCCTTC TGATACTCAA AGAAAAATCA TCATGTCCCA CCTTAACCAA GAAGGGATTA ACAGTATTCA AACGGCAGCC AGCATTAGCG AAGCAAAAGA GGTTATTGGC CGCCATAAAC CCGACCTTAT TGTCAGTGCC TTACACTTTA ACGACGGTGA AGCCATAGAT TTACTCCACT TCATTAAGGG CCATAGAGAC TATCAAGACA TACAATTTAT GTTAGTGTCC AGTGAATGTC GCCGCGAGCA ATTAGAGATT TTCAGGCAAT CAGGGGTCAT AGCCATATTG CCTAAGCCGT TTAACAGTGA ACACTTAGCC ACTGCGTTAA ACTCGACCGT AGATTTGATC AACCATGAAG AACTGGACCT GAGTCATTTC GATGTGCACA ACTTACGTGT GTTAGTGGTC GATGATAGCC GCTTAGCCCG CAATGTAATT AAGCGCACCA TAGGCAACTT AGGCATTAAG CTTATCACCG AGGCTGTGGA TGGCGAAGAA GCCATCAGCT TGATGCAGCA GCACATGTTT GATCTGGTGA TCACCGACTA CAATATGCCC AGTGTCGATG GTTTAGCCTT AACCCAATAC ATACGTAACG AAAGCACTCA GTCACACATT CCTATTTTGA TGGTGTCTTC AGAAGCCAAC GATACCCACT TAAGCAACGT ATCCAGCGCT GGGGTAAATG CCTTATGCGA CAAACCCTTT GAGCCCAAAT TAGTCAAACA GATACTGTAT CAATTGCTTG AAGAGTGA
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Protein sequence | MHTISPNDLS ILLLEPSDTQ RKIIMSHLNQ EGINSIQTAA SISEAKEVIG RHKPDLIVSA LHFNDGEAID LLHFIKGHRD YQDIQFMLVS SECRREQLEI FRQSGVIAIL PKPFNSEHLA TALNSTVDLI NHEELDLSHF DVHNLRVLVV DDSRLARNVI KRTIGNLGIK LITEAVDGEE AISLMQQHMF DLVITDYNMP SVDGLALTQY IRNESTQSHI PILMVSSEAN DTHLSNVSSA GVNALCDKPF EPKLVKQILY QLLEE
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