| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0618 |
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| Symbol | |
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| ID | 4016993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 707148 |
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| End bp | 708791 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954603 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_561631 |
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| Protein GI | 91791980 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC GCTCTGACAT ACTTCGTACC TATCAAAGCA TACACACTTG GACGGGCATC
CTCTCTGGAT TAGTGCTCTT TATTGGCTTT TACGCTGGGG CATTATCATT ATTTAAACCA
CAAATTACCC AGTGGGCCAC CCCAGTTCAT CAGCATTTAG CTGCCATCCC GCAGGCTAAA
TTAGACAATT TAATCTCCCA AGCTTTTAAA GAATATCCTA AAACTCAGCA GGGATTTATT
GTTGATCTTA GCGGGGACAC CTCACCCTTA AGTTGGTATA CACAAGGTGG AGGACGCGGG
ATCCGCTTAG ATGATATCCG CAGTCACGCA AGCCTTGATG ATAATGATAA AATTATTAGC
CAGACTCATG CTCAGAATGA ATTAGGCAGC TTAATCGATC AGCTACATCG CACCGCTGGG
ATCCTGGGTG AGGTTGACCA TTTCGAGGTT GGGGTGCTGA TCTTGGGCCT TGCAGCAGGT
TTGTATTTTT TAGCCTTAGT GTCAGGCGTT ATTTTTTTAC TGCCCACATT GACGAAAAAC
TTGTTCGCCT TAAGAAAAAA TAAAGGAGCT AGCCGTTTCT GGCTGGATAG CCATAATCTC
ATCGGCGTTA TCAGTCTCCC ATTTCATTTG ATTATTGCTT GGACTGTTGT GGTATTTGCC
TTTCATGATT TTGCCTATGG CGGGCTTGGG CTTATTTATG GTGATAAGCC ATTATTTGAA
CGGCCGCAAA GAAGCGCTAT GATCTATAAA ATAAGTGACT TGCCTTCTAT CCAGACTTAT
ATCAATAAAG TGGCTGAAAT CACTGATGGC TATGACATCA AATCTTTAAC CTTTTCTAAT
CTGTCTTCAC CGGGTCCTGC GCTGGCCATT AATATCACCA GCGACACTCA AGTTATGCGC
TCTGGTTATA GCGATGTGAT TTATATGCAT CCTTATACCT TGGAGGTGCA ATTTAGCACC
GCAAGCTTAG AAAATGGGCC GATTTACGAC CCAATAGTAA CCAGTTTCTT TGCGCTGCAC
TTTGGAAATT ATGCCGGTAA TTTTGGCCGC TTGGTGTATT TTATACTTGG GCTACTTGGG
GCCTTTTTAT TTTACAGTGG CAATTTACTT TGGCTAGAAA AGCGTAGACA AAAACAGTCC
ATTCAGAGCC GCGCTAACCG CTTCATGGGG GCATTAACCA TAGGGGTATG CTTGGGCTCT
ATGCTAGGGG TAGCTTGCAG TTTTTTAATC ACTAAATGGC TCTATTTAGT CGCCGAGCAA
GTTAACACTT ATTATATGAT GTGCTACTAC AGCATCTTTT TTAGCGCCCT TGGTTACAGC
TTTATTAGGG GTACCGCCAG CGCTGCAATT CATTTACTTT ATGCACTATT CTTAAGCTGC
CTGTTAATTC CTACTACCAG TTTATTGGCC GTATTATTGC CAAGCCTATT TTCTGAAGGC
ATTAGAGCAC CATCATCCTA TCTTATTGAC GTGTTTGCAG CTTTGTTTGC TATTGCTTTC
TACCTAGGGG CTAAAAAAGT GCAACAGCGC GCCTATTATG GAGAGCCAAA CAGTATTTGG
GCTATCTCAA CGGCTCACAG CTCAAGCTTA GAAAAAACAC CAGAATCAAG ATTAGAGTCA
AATCCTGCAA GTCAGCAGTC TTAA
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| Protein sequence | MKIRSDILRT YQSIHTWTGI LSGLVLFIGF YAGALSLFKP QITQWATPVH QHLAAIPQAK
LDNLISQAFK EYPKTQQGFI VDLSGDTSPL SWYTQGGGRG IRLDDIRSHA SLDDNDKIIS
QTHAQNELGS LIDQLHRTAG ILGEVDHFEV GVLILGLAAG LYFLALVSGV IFLLPTLTKN
LFALRKNKGA SRFWLDSHNL IGVISLPFHL IIAWTVVVFA FHDFAYGGLG LIYGDKPLFE
RPQRSAMIYK ISDLPSIQTY INKVAEITDG YDIKSLTFSN LSSPGPALAI NITSDTQVMR
SGYSDVIYMH PYTLEVQFST ASLENGPIYD PIVTSFFALH FGNYAGNFGR LVYFILGLLG
AFLFYSGNLL WLEKRRQKQS IQSRANRFMG ALTIGVCLGS MLGVACSFLI TKWLYLVAEQ
VNTYYMMCYY SIFFSALGYS FIRGTASAAI HLLYALFLSC LLIPTTSLLA VLLPSLFSEG
IRAPSSYLID VFAALFAIAF YLGAKKVQQR AYYGEPNSIW AISTAHSSSL EKTPESRLES
NPASQQS
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