Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0615 |
Symbol | |
ID | 4017029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 700878 |
End bp | 702050 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637954600 |
Product | O-succinylhomoserine (thiol)-lyase |
Protein accession | YP_561628 |
Protein GI | 91791977 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGC ATAAATTAGC CACCTTGGCC GTTCGTCACG GCATAGAGTC GGATACTCAG CATGGATCTG TGGTGCCACC GATTTATTTG TCGACCAATT ACAGCTTTGA AGGGCATCAA CAGCCCAGAG AGTTTGACTA TAGCCGCTCG GGCAACCCAA CGCGTAACTT ATTGGCAGAG GCGCTGGCAA AGTTAGAGCA AGGTCATAGT GCAGTTGTCA CTTGTACTGG TATGGCGGCC ATCACCTTAG TCACCAGTTT GTTAGCCCCT GAAGATGTGT TAGTCATCCC CCATGATTGC TATGGCGGCA GCTACCGATT GTTTACTCAC TTGGCAGCTA AGGGCAGTTT TAAGCTCGTG GTTATCGATC AAAATGACGC TAATGCATTG GCAGACGCTC TGCAGCTTAA GCCTAAATAT GTTTGGCTAG AAACTCCGTC GAATCCACTG CTTAGGGTGG TGGATATCAG CGCAATTTGC CAACTGAGTC ATCAAGTGGG CGCTAAAGTG GTGGTGGATA ACACCTTTCT TTCCCCTGCA TTGCAACAGC CATTAACCCT AGGGGCTGAC ATAGTGGTGC ACTCCACCAC TAAATACATT AATGGTCATA GCGATGTTGT TGGCGGCGCC GTGGTGGCTA AAGATGCCGA CATTGGCGAG CGACTCGATT GGTGGGCAAA TACCTTAGGT TTAACCGGTA GCGCGTTTGA TAGTTACCTG ACCTTACGTG GACTTAGAAC ATTAAGTGTA CGAATGCGCC AACATCAGGA AAATACCCAA CTAATTATTG AGTCCTTAAT TAACAGTCCA GTGGTGAATA AGGTATATTA CCCAGGTTTA ACAGCCCACC CAGGTCACGA AATTGCATTA AAACAGCAAC AAGGTTTTGG TGGCATGGTA AGTTTTGAGC TTAATGGTGG AGAAGCAGCA CTCGTGGCCT TCTTAAGTGA GCTTAAATTA TTTAGTCTTG CCGAGAGCTT AGGGGGGGTG GAGAGTCTGG TTGCCGTGCC AGCCACCATG ACCCACAGAG CCATGACGGC CAAGGCCCGT GATGAGGCTG GCATTAGTGA CACATTATTG AGATTATCTG TCGGCATCGA AGATGGCGTT GATCTTGTCG CCGATATTGA AGCAGCCTTA GCCGCTGTTG CAACACTGAA AGTCGTTGTT TAA
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Protein sequence | MSQHKLATLA VRHGIESDTQ HGSVVPPIYL STNYSFEGHQ QPREFDYSRS GNPTRNLLAE ALAKLEQGHS AVVTCTGMAA ITLVTSLLAP EDVLVIPHDC YGGSYRLFTH LAAKGSFKLV VIDQNDANAL ADALQLKPKY VWLETPSNPL LRVVDISAIC QLSHQVGAKV VVDNTFLSPA LQQPLTLGAD IVVHSTTKYI NGHSDVVGGA VVAKDADIGE RLDWWANTLG LTGSAFDSYL TLRGLRTLSV RMRQHQENTQ LIIESLINSP VVNKVYYPGL TAHPGHEIAL KQQQGFGGMV SFELNGGEAA LVAFLSELKL FSLAESLGGV ESLVAVPATM THRAMTAKAR DEAGISDTLL RLSVGIEDGV DLVADIEAAL AAVATLKVVV
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