Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0588 |
Symbol | |
ID | 4016618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 670489 |
End bp | 672183 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954573 |
Product | putative siderophore biosynthesis protein |
Protein accession | YP_561601 |
Protein GI | 91791950 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4264] Siderophore synthetase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACATT GGCAAACTGC TCAACTCAAT TCGTTGATTG CTGCATTGTA TTTAGAAAAT TTCGCCAATT TTCGCCATTT TTGTCACCTC GATGGTGAAA AACTGTTGAT TACCTTAGAC CCATCGCGCA CTTTAAAGCT ATCAGTCCGA CAACCGACAA GGGCAACCTG CCTGCTACCT ATGGTGATTA AGGATGAGTC TGTCATCCTC ATCGTGGAAG GCGGCGAGCA TGCCAGTCGG GTGACCTTGT ACGACATGCT TAACGTGTTG ACGAGTGCCC ATTGGTGGCC CGAAAGCACT CAGGCGAAAG CCATCAATTT GTGGCACCAA GCACTGCAAG GTCGAACAGC ATTGGCAAAC TTGCCGGCGC TAAGTTCGGT TTCGCTTGAG CAAGCAAGCT TGTCTGAAAC TACGTTTGAA ACTGTAATGG AATATAGGGC GATGCAGATT GATCGCCCAA ATCATCCTTT TGCCCACGCT AAAGGTTCAT TGCAGGCCTT GCTTGGCCAA AGCAGTACAG AGATTGATTG GTGGGCGTTG CCCAAAGAGC ACATTTTTAC CCAGCAAATC ACAGGGCCGG CAATGGCACT ACTGAATCGT GAACAGCAAC ATGATATCGC AGTGAAAATG CGCGCTTTAT TCGCAGAAGA TGCGACTCTT TATCTCGCGT TACCCGCCTT GAAAAGTGAA CGCCCCATCA TCAGCTTACT GCCAGCTGCC GTTTGTCTTA ATACTCAAAC ACTTGTACAG AGCACGACTA GCTCATTGCG AAGCTTTCAG TTTACGGCCA GGCAACACGT CAAGTTTGCT ACCAGTCAAA CCACCTTAGG TGCTAAGCGC ACTATGCCAC CGCGTTACTT ACATAATGGC GATGCCGCAT ATCAACTACT GCAGGCACTA GTATTACGAA GTGCGGTAGT GGCTGATTTA CTGCAATTGT GTGATGAGCG CGCTTGGTGG AGCACAGGGA GCGAGCACAA TCTGATCGCT TGTCAGGGAG AGTTTGCGGT ACAAATGCGC AGTTTCCCCG CCACAGGGCT GGCCAAATTA CCACGCTTTA CCATGGCGGC ACTCAATCAT CCGCAGAGCT GGCTATGGCT TAAAGCCCAA GGTTTTTCAC TACCCGCACT GTGGATGCAA CTGTTAACTG GTTTTGTGCA GCTGCATCTC ACACTATGGC AGTACGGTGT ATTACCGGAA TGTCATGGCC AAAATCTACA GGTTTGGCTA GACGATAGTG GCAGTTGGCG TTTTATTTTA CGCGATCACG ACACCTTAAG AATTTGCCCC ACACAGTTAC AGCATCAAGG CATGGAGGTG CCGGACTATA AAATAAACTG GCACACACCC AACACCTTAG TCCTACCCGA TTTAGCAGCC CTACTGGCTT ATTTCACGAC ACTAGGGGTG CAAGTTAACC TCTATCCGAT CGCCAAAGCA CTGGAAAGTA TCGGTGAATA CCATGAAACA CAATTCTGGC AGCAGCTCAG AGAGTGCGTT GCCAACGTTG CCAAAACCTT GCCAACTGAA GAACGAACCG TACTAGAAAG CAACCTATTG CATGCACAGG AGTGGCCATT CAAAGCCATT ATTGCCCCCT TACTCCATGC CAATGAAAGC GCAACCGGTA TGCCAAGTGC GCTTTACCGT ATCGATAATC CCTTGATAGC GCACAGTAAG GAACTGTATG CGTAA
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Protein sequence | MQHWQTAQLN SLIAALYLEN FANFRHFCHL DGEKLLITLD PSRTLKLSVR QPTRATCLLP MVIKDESVIL IVEGGEHASR VTLYDMLNVL TSAHWWPEST QAKAINLWHQ ALQGRTALAN LPALSSVSLE QASLSETTFE TVMEYRAMQI DRPNHPFAHA KGSLQALLGQ SSTEIDWWAL PKEHIFTQQI TGPAMALLNR EQQHDIAVKM RALFAEDATL YLALPALKSE RPIISLLPAA VCLNTQTLVQ STTSSLRSFQ FTARQHVKFA TSQTTLGAKR TMPPRYLHNG DAAYQLLQAL VLRSAVVADL LQLCDERAWW STGSEHNLIA CQGEFAVQMR SFPATGLAKL PRFTMAALNH PQSWLWLKAQ GFSLPALWMQ LLTGFVQLHL TLWQYGVLPE CHGQNLQVWL DDSGSWRFIL RDHDTLRICP TQLQHQGMEV PDYKINWHTP NTLVLPDLAA LLAYFTTLGV QVNLYPIAKA LESIGEYHET QFWQQLRECV ANVAKTLPTE ERTVLESNLL HAQEWPFKAI IAPLLHANES ATGMPSALYR IDNPLIAHSK ELYA
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