Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0510 |
Symbol | |
ID | 4017109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 578546 |
End bp | 579163 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637954496 |
Product | Sel1 |
Protein accession | YP_561525 |
Protein GI | 91791874 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.209308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGAC TATCACTGTT ATTATTGTGT TTATTGCAAT CTTCCGCGAT GGCAGAGTCA CTTGCCGTTG ATATTTATAG CAATGAACAA CTAATAAAGT TATTACGTGA TGGTACCTAT CTGCACCGTG TTAAGGCTGA TGAATGTCAG CTAGTGCAGG ATATAGAAGC CAGAGCCGAA GTATTACAGC AGCCCTTGTA TCAATTTTTG TGGGGCGAAA TGCTCAATCA AGGTGTCTGT GTTAAGCAAC ATGCCTCCCG CGGAATGGCA ATGTTGCGTA CAGCTGCTGA ACAGGGCAGC GCCGAAGCTA TGGTAAAATT GGCTGAATAC TATTACCAAG GTAAGTTGGT CATTAAAGAT AAAGAACGAG CGGTGCAATA CGCATTGCCG GCAGCAACCA ATGGCAGTAT CGCAGCACAA ATGATGCTGG TGAGACTGTT TAGTGAAGGT CACGGTAGCT CGAGAGATTA TCCATTGGCT TACCATTTAC TGTACAACAA TGTATTTGAA GACGAGGCAA CACAAAATAA AGCCTTGTCA TTATTGCGAG TTTTAGCTGC AAAAATGCCC ACCAGTGTTG TGGAAAGGGC GCAGCAAGCT CGCTTCTCCA CCCGTTAA
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Protein sequence | MLRLSLLLLC LLQSSAMAES LAVDIYSNEQ LIKLLRDGTY LHRVKADECQ LVQDIEARAE VLQQPLYQFL WGEMLNQGVC VKQHASRGMA MLRTAAEQGS AEAMVKLAEY YYQGKLVIKD KERAVQYALP AATNGSIAAQ MMLVRLFSEG HGSSRDYPLA YHLLYNNVFE DEATQNKALS LLRVLAAKMP TSVVERAQQA RFSTR
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