| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0443 |
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| Symbol | |
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| ID | 4017977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 513867 |
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| End bp | 514880 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637954429 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_561458 |
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| Protein GI | 91791807 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0613635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAG TTGAGTTAGA CAAAACCCAT AAGTTAAGAG CAAAAGTGTT GATAGGAACT
TGTGGATTAC TTGGAATGCT CGGGCTGTTA CTTGGGGTGA TCAACATTCT TTTTATAGGC
TTAAGTCCAG TGTTAGCAGG CCTGCAGCTA GGATATGCCT TGGTGTCATT TTGGTTAATG
CAACGGGCAC TAAATGATAA TCACAAACCT TGGGAGGCTC ACTTATATGT TTATGGATTA
ACGGCAATAG TGATGTTTGC TGTTTATGTA GCAAGGTTAG AAAGTTTTAT GTTTTGTTGG
GCGTTGATCT TACCCATTCT TTACTTGCTT ATGCTTGGCA AACAAACAGC CACTCTACCT
GCCAGCTTTC TGTTTATTTT TGTATTAATC GACATTAGCA TTAAATCTGA TGTCATGCCT
TGGCCTATGA TTTTGAACTT TTCTTGCAGC TATGCACTGA TTTGGCTTAT TGCTTATGTC
TATGAAAATA ATAGGGAACG CTCTGAAAAT GAATTACAAA CATTGGCACT GCTAGATCCC
TTAACCCAGC ATTACAATCG CTTAGCCTTA AGTAAGAGAT TTCAATCACT TTCTCAAACT
TCCACTCTGC CTATGTGCAT ATTATTGTTA GATCTCGATT ATTTTAAAGT GATTAATGAT
ACCTATGGTC ATGAAGCGGG TGATATTGTC CTGAAGGCTT GTGCTAAACA AATAAGCAGT
ATTGCGGGCT ACAGTGACAC TTTTAGGGTG GGTGGTGAAG AGTTCTGTGT GTTAGTGCAA
GCTGAACATG CAAACCAAGC TGTTGAGTTG GCGGAATCAA TTCGAAAACT GATAAGTGAC
ACTGAATTTT TATTTGAAAA TCAAAACTTA GCTGTGACAG TAAGCGTTGG GGTCGCAACA
TTCGAGGCTA AGATGACACT GTCAAACTTG CTGGCCAAAG CCGATAAGCA GCTATATTTA
GCCAAAGATT TAGGCAGAAA CAAGGTGATG TTTGACGGCG GTTATTTAAA ATAA
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| Protein sequence | MHEVELDKTH KLRAKVLIGT CGLLGMLGLL LGVINILFIG LSPVLAGLQL GYALVSFWLM
QRALNDNHKP WEAHLYVYGL TAIVMFAVYV ARLESFMFCW ALILPILYLL MLGKQTATLP
ASFLFIFVLI DISIKSDVMP WPMILNFSCS YALIWLIAYV YENNRERSEN ELQTLALLDP
LTQHYNRLAL SKRFQSLSQT STLPMCILLL DLDYFKVIND TYGHEAGDIV LKACAKQISS
IAGYSDTFRV GGEEFCVLVQ AEHANQAVEL AESIRKLISD TEFLFENQNL AVTVSVGVAT
FEAKMTLSNL LAKADKQLYL AKDLGRNKVM FDGGYLK
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