| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0411 |
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| Symbol | |
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| ID | 4017833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 481515 |
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| End bp | 482504 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637954398 |
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| Product | zinc-binding alcohol dehydrogenase |
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| Protein accession | YP_561427 |
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| Protein GI | 91791776 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.201425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCT CTACCCATGT TAGTTTCACT CAGCCCGGCA ACGCCGATGT GATGACCTTT
AGTGCGACAA ACCTAGCCCA GCCGCTAGCC GGACAAGTGC AAATCAAGGT GTATGCCGCC
GGGGTGAATG GGCCTGATAT CAAGCAGCGC ATGGGGGCCT ATCCTGCGCC AGAAGGTGCA
AGCCCTATTC TGGGGTTAGA AGTCTCAGGC GAGATATGCG CCTTAGGAGA AGGCGTTAGC
CAATGGCAGT TGGGCGATAA AGTCTGCGCC TTAGTGCCAG GCGGTGGCTA CAGCGAGCGG
GTGAATACCT TTGCCGCCCA TTGCCTGCCT ATCCCTGAAG GATTGAGTTT CGAGCAAGCC
GCCGCTTTGC CTGAAACCTT GTTTACCGTG TGGGGCAATC TATTTATGCG CGCCGGCCTA
AAGGCGGGAG AATCTGTGCT CATTCATGGG GGCTCAGGCG GCATAGGTAC CACGGCAATT
CAGTTAGTCA GCGCCTTAGG CGCCGATGTG ATAGTGACCT CAGGCAGTGA TGACAAGTGC
CAGTATTGTC TCGAACAAGG GGCGAGAGTT GCCATCAATT ATAACCAGCA AGATTTTGTA
GAACCTGTAT TGACCGCGAC TGAGGGTAAG GGCGTCAATG TGGTGCTGGA TATGGCGGGG
GGAGATTTTA TTAACCAAAA CCTCAAAGCC TTGGCGATGG ATGGACGCAT GGTGTCGGTT
GCCATGCAGC GCGGCCCGCA GGCGCAGGTA GATGTGTTTA GAATTATGGC CAAACGCATT
ACTTGGACAG GCTCGACCCT CAGGCCTCAG TCGGTTGAAG CTAAGGCTGA GATTGCCAAG
GCACTGATGA ATACAGTGTG GCCATTAATT GCAGCGGCCA AGATTTCGTT GCCCTTAGAC
AGTGTCTATC CCTTCTCTGA GGTGATAGCG GCCCATCAAA GAATGGAATC GGGTCAGCAT
AAAGGCAAGA TAGTCTTGAG CCTGATTTAG
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| Protein sequence | MTLSTHVSFT QPGNADVMTF SATNLAQPLA GQVQIKVYAA GVNGPDIKQR MGAYPAPEGA
SPILGLEVSG EICALGEGVS QWQLGDKVCA LVPGGGYSER VNTFAAHCLP IPEGLSFEQA
AALPETLFTV WGNLFMRAGL KAGESVLIHG GSGGIGTTAI QLVSALGADV IVTSGSDDKC
QYCLEQGARV AINYNQQDFV EPVLTATEGK GVNVVLDMAG GDFINQNLKA LAMDGRMVSV
AMQRGPQAQV DVFRIMAKRI TWTGSTLRPQ SVEAKAEIAK ALMNTVWPLI AAAKISLPLD
SVYPFSEVIA AHQRMESGQH KGKIVLSLI
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