Gene Sden_0201 details

Gene Information

• Locus tag: Sden_0201
• ID: 4017921
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 221336
• End bp: 223504
• Gene Length: 2169 bp
• Protein Length: 722 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637954177
• Product: hypothetical protein
• Protein accession: YP_561221
• Protein GI: 91791570

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTTACG TTAACTTTTA CTATAACGCT AACCATTACC TTTACTTGCA AAAAGACAGC 
GCGGATCGTG AGTTACGCAG AATAACCGCC ATGGATGCCC TCGGGAATAT CACGGCGCAA 
AGCTTTGCCA ATGGCACCAG TGAGGCGCGC CGCTTTAACC AGCGCACGGG CCGCATAGAC 
AGTATCGATC TCAAGAAAGG CAATAGCTAC ATTCATCAGC TAAGTTATGG TCTTTTTGAT 
GCCAAAGGCA ATGTCGAATA TCGCTCCCAC AGCTATTACA ATGGCAGCGG CATTCAAACC 
TTGGGCTTCA GTGAAAACTT CACCTATGAC AGCTTAAACC GCATCGAAAC CCGCGATCTC 
AGTATTGGCA CTGGCAGCCT CACGGGCTAT GGCTATGATG AGCAATACAG CTACGATGGC 
TTCGGTAATA TCAACAGCCG TAAAGGCTAT GCGGGCGGCA GTTATTCGGT CAATCTCGCC 
AGTTATAATT ACCTGCAAAG CACCAGTGTC AACCGACTCG ACAGCGCCAA TGTCGATGGC 
AAAAGCTATA GCAAGTTTAT CTATGATGCC AACGGCAATA TCACCTCAGA TGGCAGCCGC 
AGCTTTAGCT ACAATGCCTT CGATAAGGCC AGTCGCATTC AGCTAGGCAG CCAATACAGC 
GCCTATCGCT ATGACAGTAG TCGCGCAGTA TTGAGCCGCA GCGATTATCG CCAAGAGGCG 
GGCGAGTGGA AAACCTTTAA TACCGATTAT ATCGGACAGT TGTACCAGCA AGAGCGCCGC 
TATAAGGGCA GTGCAGCCAT AGGCAGCAAC CTGGAAAATA CCCGTCACAA GTATATGTTG 
GGTAATATCA TGGTGGTGCG CAACCAAAAT GCCACCTTAG GCAACAGTGA ACAGGTACAG 
TATCAGCATG GCGATCATCA AGGCTCAACC TTAAGCATCA CCGATGAGCG CGGCAACATA 
CTCGAGCAGT ACTTCTATAG CGCATTTGGC AAACCGATGA AGCTTGCTGG CTCCAGCCTA 
GTGCAGGCCA TCACGCCCAT GGAGCGCGGC TATACTGGCC ATGAGATGTT ACCCAATCTG 
GACGTGATCC AGATGGGTGG CCGTATCTAC GACCCTAACT TGGCGCGTTT TTTACAGGCA 
GACCCCAACA TACAGGCACC GACTAACCTA CAGAACTATA ACCGTTATAG CTATGTGCTC 
AATAATCCGC TGACTTATAC GGATCCGAGT GGTTACTTTT TTAAGGGGCT GTTTCGAGCG 
ATAGCTGATA TTCCGATATT AAATGCAGTA ATTTCAGTAG TTTTTGCTGT TTACTGCCAA 
GCGTGCTTAG TTGCTTATAA TGCGATGTCG ACCTATTCGG TGACGGGTAG TCTAAAATCG 
ACCTTCACCT CTGGTCTTAC AACGGCAATT ATGCCGGGGG GAGGAAGTGC TGGTGGAGTA 
CTTGCAAGTG CGGCTATAGG AGGACTCTCT TCGAAGTTGC AAGGAGGTGA TTTTGGACAT 
GGTTTTATCT CCGCGGGTAT AGGTGCAGCA TTTGGAGGGC GGATAGAGGT AGGTAATCAA 
TATGCAAATG TCATTGTGGC TGCCGTTATT GGAGGAACTA TTTCTAAACT GACAGGAGGT 
AAATTTGCAA ATGGAGCGGT TACAGCCGGA TTTGCAAGAG CTGTGTTTGG AGGAGCTTCA 
AACCAAGATT CAGCCGCTGT TGCAAGTGAT TCTCAATCAC AGCTATCAGG GATAACTAAG 
GCTCTAGGTG TCGTAGGCGA TGTTATGGGA AGAATATGGT CACTTCCTAA CACTCTTATA 
GGGTTGGGTT ATGGTGGTAT TGGAATGATG TTCGGCGCTA CACCTGTGTG GGATGGGAGT 
GAGGGGATTT TGCATTTTAC TAATATGCCT GAATGGATGA TGCCTTCAGC AATGTCTTTT 
GGTCATGTTC ATGTATATGG CCAAAATTCT TACAAGAATC CAAATGGCAG TTATGTTGTA 
AATAGGTTTG ATTCTCCGAT TGTAACAGAG GAAACCTTGC ATACTAGACA ATCAGAAATA 
CTTGGTCCTT TATATCTGCC TTTACATGGC ATGGCGATGG GTGTTTCGCA ACTTACTGGT 
GGCGGGACGC ATAACAAAAA TCTGTTAGAG ATGGGGCCGG AAAGTGGAAA AAATCCTTGG 
CCTTGGTAA 

 

Protein sequence

MFYVNFYYNA NHYLYLQKDS ADRELRRITA MDALGNITAQ SFANGTSEAR RFNQRTGRID 
SIDLKKGNSY IHQLSYGLFD AKGNVEYRSH SYYNGSGIQT LGFSENFTYD SLNRIETRDL 
SIGTGSLTGY GYDEQYSYDG FGNINSRKGY AGGSYSVNLA SYNYLQSTSV NRLDSANVDG 
KSYSKFIYDA NGNITSDGSR SFSYNAFDKA SRIQLGSQYS AYRYDSSRAV LSRSDYRQEA 
GEWKTFNTDY IGQLYQQERR YKGSAAIGSN LENTRHKYML GNIMVVRNQN ATLGNSEQVQ 
YQHGDHQGST LSITDERGNI LEQYFYSAFG KPMKLAGSSL VQAITPMERG YTGHEMLPNL 
DVIQMGGRIY DPNLARFLQA DPNIQAPTNL QNYNRYSYVL NNPLTYTDPS GYFFKGLFRA 
IADIPILNAV ISVVFAVYCQ ACLVAYNAMS TYSVTGSLKS TFTSGLTTAI MPGGGSAGGV 
LASAAIGGLS SKLQGGDFGH GFISAGIGAA FGGRIEVGNQ YANVIVAAVI GGTISKLTGG 
KFANGAVTAG FARAVFGGAS NQDSAAVASD SQSQLSGITK ALGVVGDVMG RIWSLPNTLI 
GLGYGGIGMM FGATPVWDGS EGILHFTNMP EWMMPSAMSF GHVHVYGQNS YKNPNGSYVV 
NRFDSPIVTE ETLHTRQSEI LGPLYLPLHG MAMGVSQLTG GGTHNKNLLE MGPESGKNPW 
PW