Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0131 |
Symbol | |
ID | 4017215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 141236 |
End bp | 141997 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637954104 |
Product | type II secretion system protein N |
Protein accession | YP_561151 |
Protein GI | 91791500 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTTTGA GTAAAAAAAT TATCTTAGCT GTCTTACTGT ACTTAGTGTT TTTATTGGCC TATATGCCGG TAAAGTGGCT AGCCAGCATC TTACCTATGC CAGCCAATAT CAGCCTAGCT GGAGTGAGCG GCACCCTGTG GGAAGGTCAA GCCGATTTGG TGCAGTTTGG CCCAAGACAA CTTGAGCAAG TGAACTGGAG CCTAAACCCT TGGGCGTTAC TGCTGGGGCA AGCCAATGTC GACATTAACA TAGGTAATCG CGCCACTGCA GTGAGTGCCA AAGCCGACAT TAGCTGGTCT TTATCGGGTA TTAAGGTGCA AGGCTTGCGT TTCGATGCCC CCGACAGCTT CTTGATTGCC GGGGCTAAAT TACCTTTTGC CACCCAAGTG CAGGGCGAGA TAAGCCTGAT GGTGCCTGAC TTTGTTCAAG GCAAACCTTT GTGTGAGCAG TTATCGGGTA AATTATTTTT AAATCATACC GATATGCGCA ATCAGTTTGG TGAATACCCG CTGGGGAATA TGGCGCTCAC CCTGAGCTGT CAAGGCGGGG AAGTGGCCAT CAGCATGTTA GAGGCAGACA ACAAGCTTGG GATCAGCGGT ATCATCTTGC TTGGCAGCGA CAACAGCATC AAGGTCACGG CTAAAGTCAA AGCCACCGAC GGCCAGCCCC AAGATATGCG CAATTCTCTG GCCTATCTAG GTAAACCCGA CAGTCAAGGT TACTACCCAG TTAACTACCA AGGCCGCATA CCTGGCTTGT AA
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Protein sequence | MSLSKKIILA VLLYLVFLLA YMPVKWLASI LPMPANISLA GVSGTLWEGQ ADLVQFGPRQ LEQVNWSLNP WALLLGQANV DINIGNRATA VSAKADISWS LSGIKVQGLR FDAPDSFLIA GAKLPFATQV QGEISLMVPD FVQGKPLCEQ LSGKLFLNHT DMRNQFGEYP LGNMALTLSC QGGEVAISML EADNKLGISG IILLGSDNSI KVTAKVKATD GQPQDMRNSL AYLGKPDSQG YYPVNYQGRI PGL
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