| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0056 |
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| Symbol | |
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| ID | 4017179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 66110 |
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| End bp | 67420 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954029 |
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| Product | ATPase FliI/YscN |
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| Protein accession | YP_561076 |
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| Protein GI | 91791425 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.1679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTAGTC TTACCCAATT AAAGCAAGTG ACGACCAAGT ACCATTATGG TTCTGTATTA
CGCAGTGAAG GGCTTATGCT GGTGGCCTCT TTACCGCAAG CATTTGTTGG TGAGCTTTGT
ACCATTAGGC GTGCTGATGA AACCCTGCCT GATATCTCAG CTGAAGTCAT CTCAATCTCT
GAGACACAAG TTAAGTTAAT GCCTTTTCAA TCTGCTAGTG GGATTAGTTT TGGGGATAAA
TTAATTGGCA GTGGGACTTC TATAAGGCTG CCAATGGGTT CTGGCATGTT AGGGCATGTT
GTTGATGCGT TTGGTCAGCC TCTAGATGAA CAAGAGCTTG GGGTTGTACA GACTCAGTGT
GTTTTTCTAG CCTCACACAT TAATCCATTA ACGAGAGCGG CAATTGACGA GCCGTTAACC
ACAAGAATTA AAGCGCTTGA TAGCTTTATT CCTATCGGTA AAGGTCAAAG GGTGGGGATA
CTTGCAGGGA GTGGTGTCGG TAAAAGTACT TTACTTGCCA TGATGAGTGA TAGCTGTGCC
CAACAAAATG CTGTTATTGT CATTGTACTT GTGGGGGAAC GAGGCCGAGA AGTTGAAGAG
TTCGTTAATG GTAAAATGTT TAAAAGATTG CGAAGTCGTG CAGTGCTCGT TGCTGCTACA
GCGGAAGAAA TGCCTGTCAC TAGGGTCCTT GCGGTTAAGT ATGGGTTAGC ACTGGCTGAG
TCCTTATCTG CTGAGGGTAA GGAAGTTATT TTTGTTGTTG ATTCACTCAC TAGAGTGGCG
ATGGCCCAAA GAGAGATAGG TTTGGCCATT GGAGAACCGC CAACAGCTAA AGGTTACACA
CCTTCAGTTT TCTCTTTATT ACAGCGCATC GTAGAGCGTT GCGGTGCATT TCGTCATCGA
GCATCGATAA CCGCGTTATT TAGTGTGTTA GTTGAAACTG ATGATTTTGA CGATCCTATC
GTAGATACAT TAAGGGCTGT CTTAGATGGT CACATAGTGT TAGATAGAGC TCTTGCAGAA
CAAGGGCACT TTCCCGCGAT AGATGTGTTA AGAAGTGTTA GCAGGCTGAC AACGAATTTA
TTCGATGCTA AAAAAATAAA ATTGTCTCGT GCCGGTCGAA TCTTATTATC AGAATATAAA
CAGAAAAAAA TGATGATAGA TCTTGCTGAC GCAGAAGGGA CATTGACAGG CCAATTTCAG
CAATTAAAGA AAAAGCATGA CTTGTTGAAT CTATGGTTGC AACAAGACGA GCTAAGTTCG
AAAACAACTC AGGAATTAGA GCTACAACTG ATGGATATCA TAGAAGGTTA A
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| Protein sequence | MISLTQLKQV TTKYHYGSVL RSEGLMLVAS LPQAFVGELC TIRRADETLP DISAEVISIS
ETQVKLMPFQ SASGISFGDK LIGSGTSIRL PMGSGMLGHV VDAFGQPLDE QELGVVQTQC
VFLASHINPL TRAAIDEPLT TRIKALDSFI PIGKGQRVGI LAGSGVGKST LLAMMSDSCA
QQNAVIVIVL VGERGREVEE FVNGKMFKRL RSRAVLVAAT AEEMPVTRVL AVKYGLALAE
SLSAEGKEVI FVVDSLTRVA MAQREIGLAI GEPPTAKGYT PSVFSLLQRI VERCGAFRHR
ASITALFSVL VETDDFDDPI VDTLRAVLDG HIVLDRALAE QGHFPAIDVL RSVSRLTTNL
FDAKKIKLSR AGRILLSEYK QKKMMIDLAD AEGTLTGQFQ QLKKKHDLLN LWLQQDELSS
KTTQELELQL MDIIEG
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