| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3982 |
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| Symbol | |
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| ID | 3967305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 5012464 |
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| End bp | 5015904 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637923079 |
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| Product | glycosyl hydrolase family chitinase |
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| Protein accession | YP_529449 |
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| Protein GI | 90023622 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.317311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA AGCACTGCCT AGCCGCTTTG GCGCTGGCGA TTTCTACCCA TGCGTATGCC
GCACCTGGCA CGCCCAATAT TGCGTGGCTG CCCGCTACCC ACGAAAGTGG CGAAGCCATA
AACGTACATT GGGATATGTG GTGGGGTGAA AACGGCACCG AGTGGCAATT AACCGATAAC
GGCGACCTGC GCTGCAGCGG CAGCCTAACA GCCAACGGCC AAAACCAACA AAGCGCGGAA
TGCGCCGCTA ACTACAGCAG CGGCAGCCAT GCACTGCAGG TTAGCTTGTG TAATACCAGC
GGCTGTAGCG AAAGTAATGT TGTTACTATT AACGTTAACC AAGGCGCAAG TAGCAACGTG
CCACCTCAAG TATCCATTAG CGCACCGGCA AGTGCAGGGG AGGGGGACTC GATAACCCTT
AGCGCTACGG CCAGCGACAG CGACGGCACG ATTACCTCTG TAACCTTTTT AGTCGATGGT
ATTGCCATAG CTACCGATAC CACCAGCCCA TACAGCACAA ACTGGATAGC GAAAGCGGGT
ACTCACTCAC TTACCGCGCA AGCGCTAGAT AACCAAAATG CCACAGGCGA TGATTCTGTA
AGTATTAGCG TTACCAGCGC CCCTAACCAA TTGCCCAGCG TGAGCTTGGT TGCTCCCAAT
GCAAACTTAA TGGCGGGCAG CGAGACCAGC TTTGAAATAA ACGCTAGCGA CGCCGGTGGC
AGTATTAGCA GTGTTGAATT GTACTTAAAC GGCAATTTAC TCGGCACCGA TACCAGCGCG
CCTTACAACG TTAGCTGGAC AGCAGAAGCG GGCGATCACA GCATTTACGC CGTAGCAAGC
GACGATCGCG GCGGTGTGAG TCAATCGGAC ACGGTATTTT TAACCGTAGC GGAAGACACA
AATGCAGCGC CTAGCGTAAG CCTTTCAACC GTACCAACAG ACGCAATGGA AGGTGATGCA
CTCACACTTG AGGCAGCAGC AAGCGACAGC GATGGCAGTG TTGCGCAGGT GGACTTTTAC
CTAAACAACC AACTACTAGG CAGCGCCACA AGCGCACCCT ACAGTTTGCA ATGGACAGCC
ACGCGCGGCA GCCACACCTT GCGCGCAACC GCTGTGGATA ACCAAGGTAA AACAGCCAGC
GCGATTAGCA CCTTTAGCGT TGCTGCAGAC ACAAGCGCCA GCCACGAAGA CTGCCGACCA
GACGGGCTTT ACGCCACGCC AGAAGTGCAA TCGCCTTACT GTACTGTTTA CGACATACAA
GGCCGCGAGC TAATGGGCAG CGCAACGCGC CGCGTGATTG GTTACTTCAC TAGCTGGCGT
ACTGGTGGTA ACGGCCCGGC CTACCTTGCA CACCAAATTC CCTGGGACAA GCTAACCCAC
ATTAACTACG CCTTTGCCCA TGTGGATGGC AACAACCACG TTTCAATTGG CGCCAATACC
CCAACCAATG CAGCAACGGG TATGGAATGG CCAGACGTAG CCGGTGCCGA AATGGACCCA
AGCTTTAGTT ACAAAGGCCA CTTCAACCTG CTTAACAAAT ACAAAAAGCA GTACCCACAC
GTTAAAACGC TTATCTCTAT TGGCGGTTGG GCAGAAACAG GCGGCTACTT TGATAGCAAT
GGCGACCGCG TAAATTCTGG CGGCTTCTAC ACCATGACCA CCAATGCAGA CGGTTCGGTT
AACACCGCCG GTATCAACAC CTTTGCCGAC TCGGTAGTGG AGTTTTTACG CACCTACAGC
TTTGATGGCG CAGATATAGA TTACGAATAC CCCACATCGA TGAACGATGC CGGCAACCCT
TCAGATTTCG CCATCGCCAA TGCGCGTCGA AAAGGCTTAA ACGCTTCGTA CAACGTGTTG
ATGAAAACCC TGCGCCAAAA GCTGGATATA GCAGGGGAGC AAGATGGCAA GCACTACATG
CTTACCATCG CCTCGCCATC GTCAGGCTAT TTGTTGCGCG GCATGGAAGC ATTTGAAGCA
ACCCAGTACT TGGACTACGT CAATATCATG TCCTACGACT TACACGGTGC ATGGAACCAG
TTTGTAGGCC CCAATGCGGC ACTGTTTGAT AACGGCCAAG ATGCAGAGCT TATTCAGTGG
AACGCTTACG GCGGCCAGTA CAAAAATATT GGCTACCTCA ACACCGACTG GGCTTACCAC
TACTTCCGCG GCGCCATGCC GGCGGGCCGC ATTAACATTG GTGTACCTTA CTACACCCGC
GGCTGGCAGG GCGTAACCGG TGGCACCAAC GGTTTATGGG GCCAAGCATC CCTGCCAAAT
CAAAGCGAAT GCCCTGTGGG TACCGGCGGC AGCGCCACCA GTAAATGCGG CAACGGCGCG
GTGGGTATAG ATAACCTATG GCACGACAAG GATGAAAACG GCAACGAAAT GGGCGCGGGT
TCTAATCCCA TGTGGCACGC TAAAAACCTA GAAAACAATA TTCTAGGGGA TTACCTAACA
GCCTACGGCT TAGACCCAAT CAACAACCCA GATCACCAAC TTAGCGGTAA CTACCAGCGT
TATTACGACG ATGTATTAGT CGCCCCGTGG TTGTGGAACG CCGCTAAGCA GGTATTTATC
TCTACCGAAG ACGAGCAATC CATCAACCGC AAAGCCGATT ACGTAGTAGA AAACGGCATA
GGCGGCATTA TGTTTTGGGA ACTAGCCGGC GATTACCAAT TCAATGCGGC CAAGGGCCAA
TACGAAATGG GCCACACGCT AACCACCGCC ATTGCAGATA AATTTGCCAA CGCGCCAGCC
TACGGCAACC AGCGTGCAGA AATTGATATG CCCCAGCAAA CGTTAGATAT AGGCATAAAG
CTAACTAACT TTGCCTTGGG TGATAACAAC TTCCCCATTA CGCCAGACCT AATAATTACT
AACAACACAG GCCAAAACTT GCCCGGCGGC ACCGAGTTCT ATTTCGATAT CGCCACCTCT
ACCCCAGATA ACATGGGCGA CCAAAGCGCA GCGAGCTTAA CCATTGTTAG CAACGGGTCT
AACGCGGCGG GTAACAATGT GGGCGGTTTA GAAAACAACT TCCACCGCGT AAAAATAAGC
ACCCCAAGCT ACCTCACCCT TGCCGACGGC GAAGAATGGA AAGTAGTACT TAAATACTAC
CTACCAGTTT CTATGCCTTC TAACTGGGTG GTTAACGTAG CTGGCGAAGA GTTTGCGCTT
AGCAGCGAGT ACCCTAACTT GCCGATGGGC AGCATTAGTT CTGGTGGCGG CAATAACGGC
GGTGGCAACA CCGGTGGCGA TTGCAGCAAC GCAAGCGACT ACCCAGCTTA CCCTAACTTT
CCACAAAAAG ACTGGGCCGG AAACCCCAGC CACGCCAACG CCGGTGACCG CATGACCCAC
AACAACGCGC TGTATGAAGC CAAATGGTGG ACAAGTGCAA CCCCAGGTAC ATCCGATTGG
GACTTGGTAT GTACGTTTTA A
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| Protein sequence | MKNKHCLAAL ALAISTHAYA APGTPNIAWL PATHESGEAI NVHWDMWWGE NGTEWQLTDN
GDLRCSGSLT ANGQNQQSAE CAANYSSGSH ALQVSLCNTS GCSESNVVTI NVNQGASSNV
PPQVSISAPA SAGEGDSITL SATASDSDGT ITSVTFLVDG IAIATDTTSP YSTNWIAKAG
THSLTAQALD NQNATGDDSV SISVTSAPNQ LPSVSLVAPN ANLMAGSETS FEINASDAGG
SISSVELYLN GNLLGTDTSA PYNVSWTAEA GDHSIYAVAS DDRGGVSQSD TVFLTVAEDT
NAAPSVSLST VPTDAMEGDA LTLEAAASDS DGSVAQVDFY LNNQLLGSAT SAPYSLQWTA
TRGSHTLRAT AVDNQGKTAS AISTFSVAAD TSASHEDCRP DGLYATPEVQ SPYCTVYDIQ
GRELMGSATR RVIGYFTSWR TGGNGPAYLA HQIPWDKLTH INYAFAHVDG NNHVSIGANT
PTNAATGMEW PDVAGAEMDP SFSYKGHFNL LNKYKKQYPH VKTLISIGGW AETGGYFDSN
GDRVNSGGFY TMTTNADGSV NTAGINTFAD SVVEFLRTYS FDGADIDYEY PTSMNDAGNP
SDFAIANARR KGLNASYNVL MKTLRQKLDI AGEQDGKHYM LTIASPSSGY LLRGMEAFEA
TQYLDYVNIM SYDLHGAWNQ FVGPNAALFD NGQDAELIQW NAYGGQYKNI GYLNTDWAYH
YFRGAMPAGR INIGVPYYTR GWQGVTGGTN GLWGQASLPN QSECPVGTGG SATSKCGNGA
VGIDNLWHDK DENGNEMGAG SNPMWHAKNL ENNILGDYLT AYGLDPINNP DHQLSGNYQR
YYDDVLVAPW LWNAAKQVFI STEDEQSINR KADYVVENGI GGIMFWELAG DYQFNAAKGQ
YEMGHTLTTA IADKFANAPA YGNQRAEIDM PQQTLDIGIK LTNFALGDNN FPITPDLIIT
NNTGQNLPGG TEFYFDIATS TPDNMGDQSA ASLTIVSNGS NAAGNNVGGL ENNFHRVKIS
TPSYLTLADG EEWKVVLKYY LPVSMPSNWV VNVAGEEFAL SSEYPNLPMG SISSGGGNNG
GGNTGGDCSN ASDYPAYPNF PQKDWAGNPS HANAGDRMTH NNALYEAKWW TSATPGTSDW
DLVCTF
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