Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3962 |
Symbol | |
ID | 3967266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4992676 |
End bp | 4993566 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637923059 |
Product | fructokinase |
Protein accession | YP_529429 |
Protein GI | 90023602 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.177192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATA CTTTAATTGC TGCCATAGAA GCGGGCGGTA CAAAAATTAA TATAAGCGTT GGTTATACGG TAGATGAACC ACTTATGGCT ACCCGTATTC CTACCCATAC ACCAAGTGAT ACTTTGCCAG CTTGTGTCGA TTTTTTACAA ACGGCACAGA ACAAATTAGG TGCTATTAAA GCATTGGGTA TAGCAAGCTT TGGGCCGGTA GATATAGACA AGCAATCAGC TAGCTATGGC ACCATTTTAA ATAGCCCGAA ATTAGCATGG TGCGATCAGA ATATTCTAGA AGCATTTAAC GTATTTGATT GCCCCATAGC ATTGGACACC GACGTAAACG CGGCAGCTTA CGCAGAGCAT CAGCGATTAG AAAAGAGTAA CTGCAATTCT GTATATATTA CGGTAGGTAC AGGCGTAGGT GTAGGCGTGG TTATAAATGG CGCAACGCTT ACGGGTGAGT TACACCCAGA GCTAGGCCAT TGCTACAGCG AACGATTGGC AATAGAACCA AAAGGAGTTT GCATTAGGCA CGGCGATTGT GTTGAAGGGT TAATCTCTGG CCCAGCGTTA AAGCAGCGAT GGAAAATATT ACCAGAAGAG GCCGAGAGCG ATCACATTAT GTGGGAATCG GTCGGTTTTC ATTTGGCGCG CCTTTGTTAT ACGGCTACTT TAGCCTACTC ACCCAACAAC ATTATTCTTG GCGGTGGGGT GCTGCAAAAT ACTTTTATTA TTCCGATGGT ACATAAATAT TTTGCTCATC TTGCAGGTGG ATACCTGCCA GCGAAAGCAG TGCCACAGAA TTTAGATAGT TTTATTAAGG CGTCTTCCTA TTCCACTGGT GCTGGCTTAG CTGGCGCATT TCTACTAGCA AGGGAAAATA TTAATGAGTA A
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Protein sequence | MSNTLIAAIE AGGTKINISV GYTVDEPLMA TRIPTHTPSD TLPACVDFLQ TAQNKLGAIK ALGIASFGPV DIDKQSASYG TILNSPKLAW CDQNILEAFN VFDCPIALDT DVNAAAYAEH QRLEKSNCNS VYITVGTGVG VGVVINGATL TGELHPELGH CYSERLAIEP KGVCIRHGDC VEGLISGPAL KQRWKILPEE AESDHIMWES VGFHLARLCY TATLAYSPNN IILGGGVLQN TFIIPMVHKY FAHLAGGYLP AKAVPQNLDS FIKASSYSTG AGLAGAFLLA RENINE
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