Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3947 |
Symbol | |
ID | 3967212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4974930 |
End bp | 4976186 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637923044 |
Product | hypothetical protein |
Protein accession | YP_529414 |
Protein GI | 90023587 |
COG category | [S] Function unknown |
COG ID | [COG4289] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.174675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAC GCGATTTTTT AAACGCCGCT GCATTGGGCG GTGCCGCATA TATGACGGGT TTACCGCAAT TTGCCAATGC TAAAACGCTT ACTACCGGTC AACAGGATCA CACCTACTTT GCAAATTTAT TAGAGAAAAT TTGTTCGCCT ATTTTGCATT TAATGGCTAA CGAACAATTC CATGCAAAGT TCCCATTAGA GGTAGGAGCC AACAGTGATG GACGCGACCA TCGCGTTGCC TACCTTGAAT GTTTTGGCCG CACCATTGCT GGCGCTGCAC CTTGGTTAGC ACTTGATACA CCCGGCCCAG AAAAAGCCAC ACGCAGCAAG CTAAGAGACC AAGCCATTGC GGCCTATGAA AATTCCGTGA ACCCCAAAAG CCCCGATTAC CTCGACTGGC AAGTAGGCCA CGGCCAAATG TTGGTGGACT CTGCCTACTA CACCCAAGCA CTTATACGTG CGCCTATTTT GTGGCAAAAG CTTACCCGTA AAACTCAGCA GCGTATTGTA AAAGAGATAA AGGCGTTGCG AAAAATTCCA CCGCCCTACA CCAATTGGCT GCTATTCGCC GCCATGAACG AAGCATTTTT AATGCAAGTA GGGGAAGAGT ACGACCCCAT TCGACTCGAT CTAGCACTGC GAAAATTTTT AGAGTGGTAC GTAGGCGACG GATGGTTTGC AGATGGCGAG CACTTCGCGT TTGACTACTA CGGCTCTTAC GTTATTCACC CCATGCTGTT AGATATATTA GAAGTGATGG CTGCCCACAA CACCTACTTT TGGCACGGGG ACATCAAAGA CGTACTGGCA ACTCATTTAA AACGCAATCA ACGCTTCGCC GAACATTTAG AGCGCTTGAT TTCACCTACG GGTACCTACC CACCTATAGG GCGCTCATTT ACCTATCGCA CCGCGGCTTT TCAACCACTC GCGCAACTAG CACTAAAACA CAAGCTGCCC GATAGCTTAC CGCAAGGCAG AGTGCGCGCA GCAATGCGCG CCGTTCACGA AGCCATTTTC AGCAACCCTT CAAACTTTAG CAAAGAGGGG TTTTTAAAAA TTGGTTTTGC AGGCGCCGAC CTTTCGCTTG CCGATTGGTA TTCCAACAAT GGCAGCATGT ACATAACAAC CGCAAGCTTT TTACCCCTTG GGCTACCACT TAGCGACCCC TACTGGCAGG TACCAGGCGA AGATTGGACA CAAAAACTGG CGTTTAGCGG GCAGAAATTT AAGAAGGATT ATTCAGTTTC TTATTAA
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Protein sequence | MKRRDFLNAA ALGGAAYMTG LPQFANAKTL TTGQQDHTYF ANLLEKICSP ILHLMANEQF HAKFPLEVGA NSDGRDHRVA YLECFGRTIA GAAPWLALDT PGPEKATRSK LRDQAIAAYE NSVNPKSPDY LDWQVGHGQM LVDSAYYTQA LIRAPILWQK LTRKTQQRIV KEIKALRKIP PPYTNWLLFA AMNEAFLMQV GEEYDPIRLD LALRKFLEWY VGDGWFADGE HFAFDYYGSY VIHPMLLDIL EVMAAHNTYF WHGDIKDVLA THLKRNQRFA EHLERLISPT GTYPPIGRSF TYRTAAFQPL AQLALKHKLP DSLPQGRVRA AMRAVHEAIF SNPSNFSKEG FLKIGFAGAD LSLADWYSNN GSMYITTASF LPLGLPLSDP YWQVPGEDWT QKLAFSGQKF KKDYSVSY
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