| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3934 |
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| Symbol | |
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| ID | 3967199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4955242 |
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| End bp | 4958370 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637923031 |
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| Product | H+-transporting two-sector ATPase, gamma subunit |
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| Protein accession | YP_529401 |
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| Protein GI | 90023574 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATT CAGAACCCAC CAATAACCCT TTGCGCGAAG GCCCAGTCGC ATGGATGGCG
CGCAACGATA TTGCCGCAAA TTTATTAATG ATTATTTTGC TGGTGGGCGG CGTCGCTATG
GCGCTGAACA TGCAAAAACA AGTGTTTCCC GAATTTGAGC TAGACGTAGT TGAAGTTTAC
GTAAGTTACC CAGGCGCCTC ACCGGAAGAA GTTGAGCAGG GGATATTACA ACCCGTAGAG
GATGCCGTGC GCGGGGTACA AGGTATTAAA GAAATGACTT CGTCGGCGCG CGAAGGGGGC
GGCAGTGTTA GCCTAGAGCT AGTCACCGGC ACCGATCGCA TGAAAGCCTT TCAGGAAATA
GACCAAGCGG TAAACCGCGT GCGCACCTTC CCGATTGATG CCGAAGACCC AGAAGTAAGT
ATTCGCGCAA ACCAACGCCA AGTAATGGAA ATTGGTTTAT ATGGCGACGT AGATGTATGG
ACCCTTCGCC GCTTGGCAGA GCAACTGCGC GACCGCTTGC TTGTAGAAGA CAATATCACC
CAAGTGTCGC TGGGCAACAC CCCTGCTTAC ATTACCCACG TAGAAGTCCC ACAGGAACAG
CTGCGACGTT ATAACCTAAC ACTTGGCGAT ATAGCCCAAC GTATAGAAGC ATCTGCACGC
GATGTGCCCG CAGGCGCAAT AGAAACCAGC CGCGGCGAAA TTTTGCTGCG CTTGAATGAG
CGCAAACAGT GGGCGAACGA GTTTGCCAAT ATCCCCATTG TTACAGGTGA CAACGGCGCA
CGTGTGTTAT TAGGTGAAAT AGCCACACTG CGCGACGGCT TCGAAGAGGC GCGCTTCCAC
TCGCGCTTTA ATCGCTACCC CTCGGTAGAG GTAGAAATAT TCCGCGTAGG TAAACAATCG
CCTTTAGATA TAGCCAAAGC GGTAGACACC GTATTAGCGG AACTCGACAA CACCCTGCCA
GAGGGCGTTA AGTACCGCAT AGATAGCAAC GACGCAGAAA ACTTTAGCGA TCGCTTAATG
CTGCTACTAG AAAACGGCGG CGTTGCAATT TTAATTGTGC TGGGCATATT GGCTATTTTC
TTAGAGCTGC GCCTAGCATT TTGGATAATG ATGGGCATGT GCATATCGTT TGTTGGGGGC
ATTTTATTTT TACCCTTCCT CGATATAAGC ATCAACATGA TTTCTATGTT TGCGTTTTTG
GTGGTGCTTG GCATAGTTGT AGACGATGCC ATTGTAGTGG GCGAAAACGT GCACGAATAC
CGGCAACGCG GTTACAACGA TCTCGATGCC GCCATTAAAG GTACACAAGA TATTGCCGCA
CCGGTTACCT TCACCATATT AACAACCATT GTTGCTTTTG TGCCGGTGAT GTTTATCCCG
GGTACTACCG GCAACTTTTG GTGGCCTTTT CCCGTAGTGG TTATTGTTGT ATTGCTGCTT
TCGCTGGTAG AAGCCCTATT TATTCTGCCT GCTCACTTAG CTCACAACAC CGTGCGCAAG
CGTTCCAAAT TAAGTGCAGC CATTCACGCT CGCCAGCAAA AAGTAGCAGC GCGTTTTAAT
AAGTTTGTAA ACGTTACTTA CAAACCATTT ATCGAAATGT GCCTTGTGCA TCGCTACATT
ACTATTAGCT CTGCATTATC GCTGCTTATT ATTGCTGGGG CATATGGCGT GAGTGATCAT
ATGGGTATGA TAATGATGCC GCGCGTCGCT GCCGACGAAA TAGAAGCAGG TGTGCGCCTG
CCCGTGGGTA CCACCCAAGA GCAAGCGGCG CGCGTAGCTA ACGAAGTTAC CGAAGCCACT
CACAAAATGT TTGAAGAATA CAACCTGCAC GAAGTTGCCG AAGGCATAAA AACCAATGTG
CGCGGCAAAA ATTTTGTGGA TGTTGAAATA GTGATGCGCC CACCGGACGA GCGCGATATG
AGTGCCGCAC AGGTCATTGA GCTGTGGCGT CAACAGATAG GTGATATTGA CGGTGTAGAC
CAAATTACCT TCGAAGCTGA ACGCGGCCCA GGCGGCTGGC GCGACGATAT TAGCGTGGAC
CTAAGCCACA CCAACACCGA CATGCTGGCT GAAGCAAGCC AAGTATTTAA AGCGCGCATG
GCGGAGTTTT CCAACACGCG CAACCTTAAC GACAATTTTA ACAAGGGCAA ACTGCAATAC
AATTTTACCC TGTTACCCGA AGGCGAATTG CAGGGCTTAA CCCCACAGGA TTTAGGCAGG
CAAGTACGCG ATGCTTTTTA CGGCGCGGTG GCCATGCGCC AATTGCGTGG CACCAACGAA
ATTGAAGTGC GGGTGAAATT ACCGCTTGAA GAACGCCAAG ATCAACACAC CCTCGACGAA
CTCATAGTGC GCACGCCCAG CAATAACGAA GTGCCACTTA AAGATGTAGC CAATTACGAA
TTAAGCGAAG CGTTCAGTTC CCTTAGCCGG CGCAACGGTA GACGCGTAAT AAACGTGGGC
ATGGATGTAG AACCACAAAG CGCCATCAAT CGGGTTGCTG CAGTTATGGA TAACGAAGTG
CTGCCGCAAT TGCGCACAGA GTTTCCCGGT TTAACCTGGA GCAAGCGCGG CAGCGAATCC
GAAATGCGCG AATCTACGCG TGTGCTTTGG GGCGGATTTA CCATGGCCAT GTTTGTTATT
TATTCACTGT TGGCGGTGGC ATTTAAAAGC TATACCCAAC CGCTTATTGT GATGATATCA
ATTCCGTTCG GCATTATAGG CGTAGTAATT GGGCACCTAA TAATAGGCTA CGATTTATCT
ATTGTGAGCT TAATGGGAGT TGTGGCTCTA TCGGGGGTTG TGGTTAACGG CGCACTTATT
ATGGTGGACT ACGCCAACAA ACGGCGCGGC GAATTAAGCG CACTAGATGC CATACGCGAC
GCAAGTGTAC GCCGCTTTAG ACCAATATTT TTAACCACGC TCACCACCTT TGGTGGCTTG
GCACCCATTA TTTTAGAAAC CTCTCGCCAA GCGGCACAAC TTATACCAAT GGCCATATCA
CTTGGCTTTG GTATTGTGTT TGCCAGTACC ATTATTTTAA TCATTGTGCC GTGTTTTTAT
ATGGTGCTAG AAGATATAAA ACAGGGTAAG CGCGCAACCG GCGATGGCTG GGGCGCTAGA
ACCCAATAG
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| Protein sequence | MSNSEPTNNP LREGPVAWMA RNDIAANLLM IILLVGGVAM ALNMQKQVFP EFELDVVEVY
VSYPGASPEE VEQGILQPVE DAVRGVQGIK EMTSSAREGG GSVSLELVTG TDRMKAFQEI
DQAVNRVRTF PIDAEDPEVS IRANQRQVME IGLYGDVDVW TLRRLAEQLR DRLLVEDNIT
QVSLGNTPAY ITHVEVPQEQ LRRYNLTLGD IAQRIEASAR DVPAGAIETS RGEILLRLNE
RKQWANEFAN IPIVTGDNGA RVLLGEIATL RDGFEEARFH SRFNRYPSVE VEIFRVGKQS
PLDIAKAVDT VLAELDNTLP EGVKYRIDSN DAENFSDRLM LLLENGGVAI LIVLGILAIF
LELRLAFWIM MGMCISFVGG ILFLPFLDIS INMISMFAFL VVLGIVVDDA IVVGENVHEY
RQRGYNDLDA AIKGTQDIAA PVTFTILTTI VAFVPVMFIP GTTGNFWWPF PVVVIVVLLL
SLVEALFILP AHLAHNTVRK RSKLSAAIHA RQQKVAARFN KFVNVTYKPF IEMCLVHRYI
TISSALSLLI IAGAYGVSDH MGMIMMPRVA ADEIEAGVRL PVGTTQEQAA RVANEVTEAT
HKMFEEYNLH EVAEGIKTNV RGKNFVDVEI VMRPPDERDM SAAQVIELWR QQIGDIDGVD
QITFEAERGP GGWRDDISVD LSHTNTDMLA EASQVFKARM AEFSNTRNLN DNFNKGKLQY
NFTLLPEGEL QGLTPQDLGR QVRDAFYGAV AMRQLRGTNE IEVRVKLPLE ERQDQHTLDE
LIVRTPSNNE VPLKDVANYE LSEAFSSLSR RNGRRVINVG MDVEPQSAIN RVAAVMDNEV
LPQLRTEFPG LTWSKRGSES EMRESTRVLW GGFTMAMFVI YSLLAVAFKS YTQPLIVMIS
IPFGIIGVVI GHLIIGYDLS IVSLMGVVAL SGVVVNGALI MVDYANKRRG ELSALDAIRD
ASVRRFRPIF LTTLTTFGGL APIILETSRQ AAQLIPMAIS LGFGIVFAST IILIIVPCFY
MVLEDIKQGK RATGDGWGAR TQ
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