Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3909 |
Symbol | |
ID | 3967174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4927818 |
End bp | 4929641 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637923006 |
Product | Na+/H+ antiporter |
Protein accession | YP_529376 |
Protein GI | 90023549 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCAAG ATCCAGTAGT ACTATTGGTA AGCGTTGGTC TTATTTCGCT AGCCTGCCAA TATTTGGCTT ACAAATTAAA ATTGCCGGCA ATTTTACCGC TGCTAATTTC TGGCATAGTG CTGGGGCCAA TGCTGGGGGT GTTACACCCC GATGAGCTAT TTGGCGATTT ACTGTTTCCT ATTGTTTCCC TATCGGTAGC CATTATTTTA TTTGAAGGTG CGCTCACCCT GCGCATGCAA GATATTGCTG GCCATGGCGC TATGGTGCGC AACTTGTGTA CCGTAGGTGT AGTTATTACA TGGCTGGTGG TAGCGCCCGT TGCCCATTAT GCGTTGGGTG TAAGTTGGCA AGTAGCCTGT TTATTTGGCG CTATTGTTAC GGTTACTGGG CCTACGGTTG TTATCCCAAT GTTGCGCACC ATACGCCCTA GCACGCGGGT GGCGAATATC TTGCGCTGGG AAGGTATTGT TATCGACCCC ATTGGCGCCT TGCTTGCGGT ATTGGTTTAC GAATTTGTAG TGGCCGATCA AAACGCACTT AGCCACACGC TGCAGGCATT TGGTTTAACT ATTGCCGTTG GTTGCGTTAT CGGCGCAGGT TTGGGCTATT TAATTGGCGT GGCGCTGCGC AACCAGTGGA TACCCCACTA CTTACAAAAT ACCGCAGTAC TCACCTTAAT GCTGGGTGGT TTTGCCGGCT CCAATATGAT TGCTCACGAA TCGGGTTTGC TAACGGTAAC CATTATGGGT ATCGGCTTAG CCAACATGAA AAACGTGGAT GTAGACGGCA TATTAGAATT TAAAGAAACT TTAAGCGTAC TGCTTATCTC TGCGCTCTTT ATTTTACTCG CCGCGCGCAT AAACTTTAGC GAAATACTCA GCGTGGGCTG GGGCAGCATT GTTGTACTGT TTGCTATTAT TTTTGTGGCG CGCCCGCTCA GCGTGTTTGC TTCGGCGCTG CGCACAGGTA TTAGTTTTAA CGAAAGGCTT CTACTAAGCT GGATAGCGCC GCGCGGTATT GTGGCGGCGG CGGTGTCGGC ACTGTTTGCG CTGCGCCTTG AAGAAAAAGG CGATGCACAG GCGGCTATTT TAGTGCCTAT GGTGTTCTTA GTGATTATTG CTACTGTTGT GTTGCAAAGC TTAACGTCGG TGTCCGTGGC TAAGTTCCTT AAACTGCGTG CGCCCTCGCC CCACGGCATA TTAATATTTG GTGCCAGTAA ATTTTCACGC GCCTTAGCTA AAGAGTTAAT CGAGCGCGAT ATATCAGTTC GCCTTTGCGA TACCAACTGG GAATCTATTA GCGAAGCACG CATGGAAAAC ATACCCACCT ACTACGGTAA CCCCATCTCT GAACACGCCG AACGCATGTT AGATTTATCC GCAATTGGCC AAGTACTTGT GTTGTCGCCC TATCGCCAAT TAAACCCATT GGTTACTTAT CACTTTGAAT ACACCTTGGG TAAAGGCAAA GTACTGGCGC TTACAAGCGG CGAACAAGAA GGCCGCGCAA GCCATAAAGT ATCTGAAGAT TACGCCCGCA AACTCAGCCT GTTTAACGGC ACCGCTACTT ACGGGCGATT AGTTGGTTTG GTAAACCGCG GCGCTAAAAT AAAAGCCACA AAATTATCTG AGGCGTTTAC CGAAGAGAAT TACCGCGAAA CCTACGGCTC CCGTGCAACC CCATTGTTTG CAGTAGATAC CCAAGGCCGT GTGCAATTTT ACACCCTAGA TAAGCCCATC AAACCTAAAC CCGATTGGAC CATTGTGAGC CTAATTGAGG ACGCGCCGCC AGCCCCTGCG CAACCAAATA TCTTAAATAG TTAA
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Protein sequence | MLQDPVVLLV SVGLISLACQ YLAYKLKLPA ILPLLISGIV LGPMLGVLHP DELFGDLLFP IVSLSVAIIL FEGALTLRMQ DIAGHGAMVR NLCTVGVVIT WLVVAPVAHY ALGVSWQVAC LFGAIVTVTG PTVVIPMLRT IRPSTRVANI LRWEGIVIDP IGALLAVLVY EFVVADQNAL SHTLQAFGLT IAVGCVIGAG LGYLIGVALR NQWIPHYLQN TAVLTLMLGG FAGSNMIAHE SGLLTVTIMG IGLANMKNVD VDGILEFKET LSVLLISALF ILLAARINFS EILSVGWGSI VVLFAIIFVA RPLSVFASAL RTGISFNERL LLSWIAPRGI VAAAVSALFA LRLEEKGDAQ AAILVPMVFL VIIATVVLQS LTSVSVAKFL KLRAPSPHGI LIFGASKFSR ALAKELIERD ISVRLCDTNW ESISEARMEN IPTYYGNPIS EHAERMLDLS AIGQVLVLSP YRQLNPLVTY HFEYTLGKGK VLALTSGEQE GRASHKVSED YARKLSLFNG TATYGRLVGL VNRGAKIKAT KLSEAFTEEN YRETYGSRAT PLFAVDTQGR VQFYTLDKPI KPKPDWTIVS LIEDAPPAPA QPNILNS
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