| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3885 |
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| Symbol | |
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| ID | 3967110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4903081 |
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| End bp | 4903809 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922982 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_529352 |
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| Protein GI | 90023525 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCA GCAAGGAACA AAAACTCGAA ACCCAGCGCA AAATTGTTAG CGCCGCAGCC
GATTTATTTG TACTAAATGG CTTCGACAAC ACCACTATGA AGCAAATCGC GCGCGAAGCG
GGGGTAGGGG ATGCCACCAT CTACAAATAC TTCGCCAATA AAGACAAACT TATTCTCGGC
TTTTACGACA CCCGCGGCGC CGACGCATTG GCCGAGTACC GCAACACCGA TGACCTAGAA
AGCTTTACCT TTGCCGAGAA GCTGCAACTA CTGGTGGACA CCTTCTTAGA GCAACTTATG
GCAGATAGGG AATTTGTTGA GCTTAGCCTT AAGCAAATAA TTAAATCGCC CATTACGTTG
CTTAAAGATG AGCTAGAAGT AGCCAAAAGC TACAAGCAAG AACTTACCAC CTTACTTAGC
AACCTCGACC ACGACGAAGC TTACCCTGAT ATCCCCATGC AAGGCATGCT GGCCACGCTA
CTAACCGACT ACATATTGGG TATTACGTTT TATTGGATGA AAGACAATTC GAAAGGGTTT
AGCAACACTA CTCAATTAAC TGATTTATCT ATAGGCATTA TTGATAGCGT ACTAAAAAGC
GGGTTTATAA ATAAAGCGAT TGATATGGCA GGTTTTATTA TTAAAACCCA TTTGTTGCGC
GGCCTAAGCA GCGGCGGGGG ATTGCTAAAT ATGATGCAGG AATTTAAAGA AACCCTCGCC
AAGCAATAA
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| Protein sequence | MKISKEQKLE TQRKIVSAAA DLFVLNGFDN TTMKQIAREA GVGDATIYKY FANKDKLILG
FYDTRGADAL AEYRNTDDLE SFTFAEKLQL LVDTFLEQLM ADREFVELSL KQIIKSPITL
LKDELEVAKS YKQELTTLLS NLDHDEAYPD IPMQGMLATL LTDYILGITF YWMKDNSKGF
SNTTQLTDLS IGIIDSVLKS GFINKAIDMA GFIIKTHLLR GLSSGGGLLN MMQEFKETLA
KQ
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