| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3871 |
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| Symbol | |
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| ID | 3967038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4880084 |
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| End bp | 4880767 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922968 |
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| Product | hypothetical protein |
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| Protein accession | YP_529338 |
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| Protein GI | 90023511 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2738] Predicted Zn-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.210798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCTACG CTTTAGGCGC TTTACTCTTA ATTGCTCTTA TTTACGGCCC ATCGCTATGG
GTGCGTTACA TTTTGCGCAA ATACAGCACC ACTCTCGATG GCATGCCCGG CACTGGCGGC
GAGCTGGCAC TGCACCTAAA AGAGCAATTT AAATTAGATG AATTAGTAGT AGAGCAAGCG
GGCGATGGTG AAAACTACTA CAGCCCGCTT GAAAATGCCG TGCGGCTAGA GCCAAGTGTA
TTTAACGGTA AATCGCTTAC TGCGGTAGCC ACCGCTGCCC ACGAAATTGG TCACGCCATA
CAATTTACCC GCAACGAGCC CGTTAGCCAT TTGCGCAGCC GCTATATGCC CATTGCTTTG
CGCTTACAAA AAGCGGGTAC CTATTTAATG TTTGCGCTGC CTATTATCGG TTTGGTTACC
AAATCGCCCC ATATAGCTGG CCTAACACTG TTAATTGGCA TTGGCACCAT GCTGGTTTCT
GTTGCCATGT ATGCGGCAAT ACTGCCAGAG GAATACGACG CAAGCTTTAA CAAAGCCCTG
CCTATACTAA AAAAGGGCCA GTACATACCC GAGGTATACC TGCCCGCGGT AAATACCATT
CTAAAAGCCT GTGCATACAC CTATGTAGCC GCAGCATTAA CCAACGTATT TAGCTTGTGG
CGCTGGCTAA GGTTTTTACG TTGA
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| Protein sequence | MLYALGALLL IALIYGPSLW VRYILRKYST TLDGMPGTGG ELALHLKEQF KLDELVVEQA
GDGENYYSPL ENAVRLEPSV FNGKSLTAVA TAAHEIGHAI QFTRNEPVSH LRSRYMPIAL
RLQKAGTYLM FALPIIGLVT KSPHIAGLTL LIGIGTMLVS VAMYAAILPE EYDASFNKAL
PILKKGQYIP EVYLPAVNTI LKACAYTYVA AALTNVFSLW RWLRFLR
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