Gene Sde_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3869 
Symbol 
ID3967036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4875187 
End bp4875660 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID637922966 
Producthypothetical protein 
Protein accessionYP_529336 
Protein GI90023509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.591941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT CAATATCCGC ATTAGCTCTT GTAGGCGCTT TAACCACTGG CACTGTGTAT 
GCCGAAGGCC AACTAAACCA AGATACCAAC CCTCAATATC AAGATCGCTC ATCAGAGCAA
TTCGATGCTC GCACTGAGCT GCAACCTAAA AACTTAAGCA CTAATCAAGG GCTACAAACC
CCCATTCTTG CCAGCGACTT AATTGACAAA GATGTGGAAG ATTCACAAGG TCGTGAAGTG
GGCGAAGTAG AAGATGTGGT TATCGACCAA TCAGGCAAAG AAATGGCGCT TATAGTGGAA
GTGGGCGGCT TTTTGGGAAT GGGTGAAAAA TCTGTTTCAA TTCCAATGTC TGAACTTACT
ATTATCAAAA ACGCCGACAA TGAGCGTACC ATTCAAATCA ACCACACTAA GCGCGAATTA
GAATCGATGC CTACGTGGAC TGAAGACAAT GTAAACCAGC TTAGCTTCCG ATAG
 
Protein sequence
MKLSISALAL VGALTTGTVY AEGQLNQDTN PQYQDRSSEQ FDARTELQPK NLSTNQGLQT 
PILASDLIDK DVEDSQGREV GEVEDVVIDQ SGKEMALIVE VGGFLGMGEK SVSIPMSELT
IIKNADNERT IQINHTKREL ESMPTWTEDN VNQLSFR