Gene Sde_3836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3836 
Symbol 
ID3966947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4836571 
End bp4836846 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content52% 
IMG OID637922933 
Productnucleoid protein Hbs 
Protein accessionYP_529303 
Protein GI90023476 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00753337 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAAAT CTGATCTTGT TGAAGCCGTG GCCAATGCCG CAGACCTTTC ACCTAGGCAA 
GCCGACGATG CGGTTTCGGC CATTTTTGAC CATATTACCA ACGCGTTAGC GCGCAAAGAT
TCGGTTAACT TGGTAGGCTT CGGTTCGTTT ATTACCCGCG AGCGCGCCGC GCGCCAAGGT
CGCAATCCGC AAACGGGGGC TGCTATCAAT ATTGCAGCCA GTGTGCTGCC AGCCTTTAAA
CCGGGTAAAA AGTTAAAAGA TGCGCTAGTG GATTAA
 
Protein sequence
MRKSDLVEAV ANAADLSPRQ ADDAVSAIFD HITNALARKD SVNLVGFGSF ITRERAARQG 
RNPQTGAAIN IAASVLPAFK PGKKLKDALV D