Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3763 |
Symbol | |
ID | 3966818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4761939 |
End bp | 4763075 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637922860 |
Product | hypothetical protein |
Protein accession | YP_529230 |
Protein GI | 90023403 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.854395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATGG AAACGAGATA TTCACCGGCT TGGTTGCCCG CGGCATTGCT TGCGGCGGTT GCTATAATTG GAGTATTGGC TACTGCCTTG GTAGTGCAAA AGTGCAAGGC GCCCCATAAG CAGCAGTTGG TGGGTGATGT GGTGCAACAG CAGCACTACG AATGGAAAAT GGTAACCACT TGGCCTAAAA ATTTCCCCGG CTTGGGCTTG GCGCCAGAAA ATTTTGCCAA AATGGTTAAC ACCATGAGTA ACGGTCGTTT AACGGTGAGC GTGCATGGCG CTAACGAAAT TGTACCGGCG CTGGGCGTGT TTGGGGCTGT GTCTTCGGGT AGTGTGCAAA TGGGGCACAG TGCTGCCTAC TATTGGAAAG GTAAAATCCC CGCCGCTGTC TTTTTTACTT CTGTTCCTTT TGGTATGAAC GCGCAAGAGC TAAACGGCTG GCTGCACTAC GGTGGCGGTT TAGAATTGTG GCGCGAAACC TATGCACCGT TTAATTTAAT TCCTTTTGCG GCGGGTAATA CCGGTGTGCA AATGGGCGGC TGGTTTAATA AAGAAATAAA CTCTATAAAC GATTTACAGG GTTTAAAAAT GCGCATCCCT GGGTTGGGCG GCGAAGTGTT TAGCCGCGCT GGCGGTACGG CAGTGAATAT CCCTGGCGGT GAGCTGTATA CTTCGCTGCA ATCGGGTGTA ATAGACGCAA CCGAATGGGT TGGCCCCTAC AACGATCTCG CATTTGGTTT TCATCAAATT GCAAAATACT ACTACTACCC AGGCTGGCAC GAACCTGGCC CCACATTAGA AATTATAGTT AACAAAGACG CCTACAACAG CCTGCCTGAA GATTTACAAA AAATAATAGA GGTTGCCGCC CGCGCGGTAA ACCAAGATAT GCTCGACGAA TACACAGCGC GCAACAATGC CGCGTTGGCA GAGCTAGTAG AAAAACATAA TGTAGATGTA CGGCCCTACC CCGATGACGT AATTGCCAGT TTAAAAACAC TGTCTGAAGA GGTGTTTGCT GAGTTGGCCG CGGATGATAA ACAATTCGCA AAGGTATATG CATCCTATAG CGACTATTTA ACCAAGGTGC GTAAATACCA CGAAATTAGC GAGGAAGCTT ATTTTGAAAA GAGGTGA
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Protein sequence | MEMETRYSPA WLPAALLAAV AIIGVLATAL VVQKCKAPHK QQLVGDVVQQ QHYEWKMVTT WPKNFPGLGL APENFAKMVN TMSNGRLTVS VHGANEIVPA LGVFGAVSSG SVQMGHSAAY YWKGKIPAAV FFTSVPFGMN AQELNGWLHY GGGLELWRET YAPFNLIPFA AGNTGVQMGG WFNKEINSIN DLQGLKMRIP GLGGEVFSRA GGTAVNIPGG ELYTSLQSGV IDATEWVGPY NDLAFGFHQI AKYYYYPGWH EPGPTLEIIV NKDAYNSLPE DLQKIIEVAA RAVNQDMLDE YTARNNAALA ELVEKHNVDV RPYPDDVIAS LKTLSEEVFA ELAADDKQFA KVYASYSDYL TKVRKYHEIS EEAYFEKR
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