Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3754 |
Symbol | |
ID | 3966789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4753250 |
End bp | 4754647 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637922851 |
Product | phosphate ABC transporter, permease protein |
Protein accession | YP_529221 |
Protein GI | 90023394 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0573] ABC-type phosphate transport system, permease component |
TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.46452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACTT CAGTACTACT TATATTTATG GCTGTCATGT TTGTTGCAGC CTATACACTT GGCCGGGGGC GCTCACTAGC GCTCACCTCC GATACAGGCG GTGCTCGCGC ACTCAATTCA CTGCCGTTTT ATTACGGCAT GCTCACAGCA TTGTGGGCGG CAGTGCCCGC GATTGTACTG TTAGGTAGCT GGAGTATTTT TGACGATCAA ATTATTCAGT TTGTTGCCAC CCAGCAAATG CCAGAAGAGA TTCGGCAGCT AGGTGAAGCT GAGCGAGGCT TGGTGCTAAA CCAAGTTTAT TCGGTAGTGG ATGGCCAATT TATAGGCGAG GCTCCCGATT ACGTGCTAGC GGCGGCCCAC CACATAACTG AAATGGAATC GATTAGCGTG TGGTTAAAGA GCATCCTAGT TATGCTCGCC ATGGTAATTG GCGGTGCGCT AGTGTGGATG CGTATCCATC CACAGTTAAA AGCGCGCAAT CAGGTAGAAA CTGCATTTCG CTACGCTCTG TTGGGCTGCG CGTGTTTAGC CATTCTTACC ACTCTCGGTA TTGTGCTGTC GGTTTTGTTT GAATCGTTGC GCTTCTTCCA CGCCGTACCT ATTACTGAAT TTTTGTTTGG CGCAGAGTGG AGCCCACAAA CGGCCATTCG CAAAGACCAA GTGGCCAGCG ACGGCAGCTT CGGTGCTGTG CCCTTATTCT TGGGTACGTT ACTTATTGCC TTTATTGCTT TAATTGTTGC CGTGCCTACT GGGCTTATGT CGGCAATATA TTTGGCAGAA TATGCACCGC GTAAATTGCG CGGCTTTTTA AAGCCACTGC TCGAAATTCT TGCCGGTATT CCCACGGTGG TTTACGGCTT TTTCGCCGCT TTGACGGTTG CGCCGTTTAT TCGAGATTTG GCTTACAGCA TAGGCTTAGA CAATTACGTC ACGGTCACAT CAGAAAGTGC CCTAGCGGCA GGCTTGGTGA TGGGCGTGAT GATTATTCCT TTTATTTCCT CTTTGTCTGA CGACGTGATT AACGCAGTGC CGCAATCGCT GCGCGACGGT GCACTTGGGC TTGGGGCAAC CAAGTCGGAA GTGGTTAAAC AGGTGGTTAT TCCCGCTGCA CTGCCAGGGA TTGTTGGTGG TGTGCTGTTG GCGGCTTCGC GCGCAATTGG TGAAACCATG ATTGTTGTGA TGGCAGCTGG GATGGCGGCA AACTTAACTG CGAACCCGCT CGATTCTGTT ACCACCGTTA CGGTGCAAAT AGTTACGTTG CTAGTGGGCG ATCAGGAATT TGACAGCCCC AAAACACTGG CTGCATTTGC TTTGGGCTTA ATGCTATTTG TTGTTACTTT GGTGCTTAAC TATGTGGCCT TGCACGTTGT GAAAAAATAT CGGGAGCAGT ACGACTAA
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Protein sequence | MDTSVLLIFM AVMFVAAYTL GRGRSLALTS DTGGARALNS LPFYYGMLTA LWAAVPAIVL LGSWSIFDDQ IIQFVATQQM PEEIRQLGEA ERGLVLNQVY SVVDGQFIGE APDYVLAAAH HITEMESISV WLKSILVMLA MVIGGALVWM RIHPQLKARN QVETAFRYAL LGCACLAILT TLGIVLSVLF ESLRFFHAVP ITEFLFGAEW SPQTAIRKDQ VASDGSFGAV PLFLGTLLIA FIALIVAVPT GLMSAIYLAE YAPRKLRGFL KPLLEILAGI PTVVYGFFAA LTVAPFIRDL AYSIGLDNYV TVTSESALAA GLVMGVMIIP FISSLSDDVI NAVPQSLRDG ALGLGATKSE VVKQVVIPAA LPGIVGGVLL AASRAIGETM IVVMAAGMAA NLTANPLDSV TTVTVQIVTL LVGDQEFDSP KTLAAFALGL MLFVVTLVLN YVALHVVKKY REQYD
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