| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3718 |
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| Symbol | |
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| ID | 3966734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4705546 |
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| End bp | 4706472 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637922815 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_529185 |
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| Protein GI | 90023358 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCA CTGAATTGCG CTACATCGTT ACCCTTGCAC AAGAGCAACA TTTTGGTCGC
GCTGCAGAGC GCTGCCATGT GTCGCAACCC ACTTTAAGTA TTGCGGTTAA AAAGTTAGAG
GAAGAGCTGA GCATAGCTCT GTTCGAACGC TCCAAAACAC GCGTGTACCC TACACCTTTA
GGTACCCAAA TTGTAGAGCA AGCGTGCCGC GTGCTAGAAC AGGCCTCGGC CATTAAAGAC
ATTGCCACCG CCGGTAAAAA CCAGCTTACC AGCCCCTTGC AGTTAGGTGC CATCTTTACC
ATTGGGCCCT ATTTGTTCCC GCAGCTTATA CCGGCTATTC AAAAATTAGC CAGCGATATG
CCGCTTTATG TGGAAGAAAG CTACACAGCC ACCTTGCGCC GCCGCTTGCG CCAAGGGGAT
TTAGACGCAA TTGTGGTCGC GCTGCCGTTC ACCGAAGCCG ATGTGGTTAC TCAAAAGCTC
TACGAAGAGC CGTTTGTGGT GTTGTTGAGT AAAGATCACC CGCTGGCTGA GAAAGAGGCC
ATCCAGCCGG ATGAGCTATC AGACTGCAAC GTGCTGCTGT TAGGCGAAGG CCACTGCTTT
CGCGACCAAG TACTGGCGGC CTGCCCTAAC CTAAAGCCCG GTATTGATGA TCCGCGCGGT
AAAATACGCA CCGCCACAGA GGGCAGCTCA CTCGAGACGC TTAAGTATAT GGTGGCCTCG
CGCTTAGGCA TTACCATTTT GCCTTTGTCG GCCGCACTAA GCGGGCATCA ATCGTCAGAT
ATGCTGGTAA CCCGCCCGTT TGCGGGTGAT GCGCCAACGC GTACTATTGC CTTGGCATGG
CGGGCAAGTT TCCCGCGCTT ACAGGCTATA GATGTGGTGC GCGAAGCCAT TGGCGAATGC
AGTATTGCCA GCAAGCCAGC TATTTAA
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| Protein sequence | MTLTELRYIV TLAQEQHFGR AAERCHVSQP TLSIAVKKLE EELSIALFER SKTRVYPTPL
GTQIVEQACR VLEQASAIKD IATAGKNQLT SPLQLGAIFT IGPYLFPQLI PAIQKLASDM
PLYVEESYTA TLRRRLRQGD LDAIVVALPF TEADVVTQKL YEEPFVVLLS KDHPLAEKEA
IQPDELSDCN VLLLGEGHCF RDQVLAACPN LKPGIDDPRG KIRTATEGSS LETLKYMVAS
RLGITILPLS AALSGHQSSD MLVTRPFAGD APTRTIALAW RASFPRLQAI DVVREAIGEC
SIASKPAI
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