Gene Sde_3634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3634 
Symbol 
ID3966591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4612404 
End bp4612799 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content44% 
IMG OID637922731 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_529101 
Protein GI90023274 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.185946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA ATCTAGAACA CCTAAAAGTG ATGGTGATCG ACGATAGTAA AACCATCCGC 
CGTACCGCCG AAACTTTGTT AAAAAAAGTT GGCTGTACAG TAGTCACTGC CACAGATGGC
TTTGACGCAT TAGCAAAAAT TGCTGATACT CGCCCAGATA TTATTTTTGT GGACATTATG
ATGCCTCGCC TAGACGGATA TCAAACTTGC GCACTCATCA AAAATAATAG CGAATTTAAA
TCTACCCCTG TCATCATGTT ATCCAGCAAG GACGGCTTGT TCGACAAGGC CAAGGGGCGG
ATAGTTGGCT CAGATCAATA CCTTACTAAG CCTTTTAGTA AAGGGGAATT GATCGGTGCA
ATTGAGGCGC ATGTTAAGGT TGCTCGCGCG AGCTAA
 
Protein sequence
MDANLEHLKV MVIDDSKTIR RTAETLLKKV GCTVVTATDG FDALAKIADT RPDIIFVDIM 
MPRLDGYQTC ALIKNNSEFK STPVIMLSSK DGLFDKAKGR IVGSDQYLTK PFSKGELIGA
IEAHVKVARA S