Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3524 |
Symbol | |
ID | 3966366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4478580 |
End bp | 4479413 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637922621 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_528991 |
Protein GI | 90023164 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCT TTAAAAACGT ATCCAAAGCC TATAAAAATC ATCACGCGCT AAGCGACATT AATTTTGCTG TGCAGCCAGG CTCCATAGTT GGGTTGTTTG GCCCTAACGG CGCGGGTAAA ACCACACTTA TTAATGCGTT ATTAGGCATG ATTAAAGTGG AGGGCGACAT TGAGGTGCTT GGGTTAGAGC CGTTTAGCCA GCGCCATAAA CTAATGGAAA GCGTTGCTTA TATTGCCGAC GTGGCTACCT TACCGCGTTG GATAACAGCA GAAAAAGTGG TAGAGCTTTT TGAAGGCGTT TACCCTAAGT TTAATCGCGA AAAAGCGTTG CGTTTAATTG CAACTACAAG CGTGCCTTTA AATAAGGCGG TTAAGCATTT GTCTAAGGGA ATGATCGCGC AGTTGCATTT GTCGTGCATT TTGGCAATAG AGGTGCCGTT ATTGGTGCTA GATGAGCCTA CGCTTGGGTT AGATATTCTT TATCGCAAGC AGTTTTACGA CATGCTAATT ACCGAATTCT ACGATGATGA TCGCTGCATT ATTGTCACGT CGCATCAAAT TGATGAGTTG GAGCAGATAT TAAATAACGT GGTAATTCTA AGCCAAGGCA AGATGGTGCT GCACGAAACG ATGGATAACA TTGCTGAAAA ATATGTGGCA GTAAAAGTGG ACGACAGCAA TTTGGAAGCG GCGCGTAAAC TCAACCCGCT AACCGAAAGC AAAGGTTTAG GTCGCACTAC CTGTATTTAT CATGGCCATA GTCACGAGAC ACTAGCGCCC TACGGGCCGC TAAGTATTCC CAGTTTAAGC GATATTTTTG TAGCTACGGT ATAG
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Protein sequence | MITFKNVSKA YKNHHALSDI NFAVQPGSIV GLFGPNGAGK TTLINALLGM IKVEGDIEVL GLEPFSQRHK LMESVAYIAD VATLPRWITA EKVVELFEGV YPKFNREKAL RLIATTSVPL NKAVKHLSKG MIAQLHLSCI LAIEVPLLVL DEPTLGLDIL YRKQFYDMLI TEFYDDDRCI IVTSHQIDEL EQILNNVVIL SQGKMVLHET MDNIAEKYVA VKVDDSNLEA ARKLNPLTES KGLGRTTCIY HGHSHETLAP YGPLSIPSLS DIFVATV
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