Gene Sde_3518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3518 
Symbol 
ID3966360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4472967 
End bp4473536 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content52% 
IMG OID637922615 
Productmultimeric flavodoxin WrbA 
Protein accessionYP_528985 
Protein GI90023158 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG TAGCGATTGT TTTTCATTCT GCATCGGGCA CAACCGGATT GTTGGCGCAA 
GCTGTCGCAG AGGGGGTGGA ATCTGTTACT GGGGTTAAGG CCATGCCATT GGAAATTTTT
GGCAAAGATA TCGTTGAAGG CCGCTATCAA AATTCAGAGC TTATTGCCCA GTTATCGAGT
GCGCAGGGGG TGGTGTTTGG CTCGCCTACT TATATGGGGT CGGTATCGGC CCAGTTCAAA
GCCTTTGTAG ATGCCACCGG TGATTTATGG GCTAAGCAAG CGTGGGCGGG CAAAGTGGCC
TCGGGGTTTA CCATTGGCTC TAACTACAGT GGCGACCAAC TTAGCACAAT TCAGTTTTTA
CAGGTGTTTG CCAGTCAACA TGGCATGTTG TGGGCTGGTA TTAATTTGGC GGGCGGCTAT
TCGCCTAAGG GCTTAAACCG GCTTGGGGCA CAATCTGGCT TAATTGCCCA AAGTGGTGAT
GGTGAGCTGC ACCAGTTAGA TTGCGATACC GCGCAATACC TTGGCGCGCG CGTAGCGCGG
TTGGCGCGTC TGTATAAGGG CGAAATGTAA
 
Protein sequence
MTKVAIVFHS ASGTTGLLAQ AVAEGVESVT GVKAMPLEIF GKDIVEGRYQ NSELIAQLSS 
AQGVVFGSPT YMGSVSAQFK AFVDATGDLW AKQAWAGKVA SGFTIGSNYS GDQLSTIQFL
QVFASQHGML WAGINLAGGY SPKGLNRLGA QSGLIAQSGD GELHQLDCDT AQYLGARVAR
LARLYKGEM