| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3469 |
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| Symbol | |
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| ID | 3966311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4411424 |
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| End bp | 4411909 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637922566 |
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| Product | tRNA/rRNA methyltransferase (SpoU) family protein |
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| Protein accession | YP_528936 |
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| Protein GI | 90023109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.029361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG TTCTCCTAAT CTTTAATGTA CAAAGCAATA CCAATATTGG TCAGCTTATC
CGTACCGCTA ATGCCTTTGG GGCCGAAGAA ATTTGCGTTA TTGGCCGCAA AAAGTTCTCT
ACCTATGGCA ATCAAAAAAC CGCCTCTACC ACTAAATTCC GACACTTTTT TCAAATAGAC
GAAGCCTTTG AATACTATGG CCAAGCCGGT TACGATTTTG TGGGGGTGGA AATTACCGAG
CAGGCTAAAT CGATAAATAA AATGCGCTTC GAACGAGACA CGCTTTTTAT TATGGGTAAC
GAAGGTGATG GCATTCACGA AAATATACTA AAGCGTTGCC ATTATTGCGT GTATATTCCT
CAATACGGTA CGGGCGCGTC TATTAATGTT AATACCGCCT GTGGCATTAT CTTTAATGTG
TATACTAAAG ATAGAGAAGA GTGCAACGCC ATTCAGGGCT TTAAGTTTAA ACGCCCAACC
CATTAA
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| Protein sequence | MKFVLLIFNV QSNTNIGQLI RTANAFGAEE ICVIGRKKFS TYGNQKTAST TKFRHFFQID
EAFEYYGQAG YDFVGVEITE QAKSINKMRF ERDTLFIMGN EGDGIHENIL KRCHYCVYIP
QYGTGASINV NTACGIIFNV YTKDREECNA IQGFKFKRPT H
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