Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3396 |
Symbol | |
ID | 3966122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4328007 |
End bp | 4330436 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922493 |
Product | putative non-ribosomal peptide synthetase |
Protein accession | YP_528863 |
Protein GI | 90023036 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
TIGRFAM ID | [TIGR01746] thioester reductase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.585497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTATC GCGAAAATCA AAATTCAGTT TATTCTGCTT CAGAGCTACC ACAAGCAATT CGCACTGTAA TTATAGGTGG TGAAGCGGTG CAGCCTGCAA AGTTGGCCCT GTGGCATAAA ACTAAAGGCC AAAGCCGTGC CGTGTTATTG AATACCTACG GCCCAAGTGA AGCTACGGTA GTAGCAACCG TGGCAGCACT AAATACCAAT GACGTACATA TAGGTACGCC ATTGGCGGGG CGTGCAGTTG CTGTAGTAAA TGGTGAAGGC CGCTGTGTAG TGCGCGGCGG CGAAGGTGAG TTGTGGTTGC TGGGCGCTGG CCTTGGGCTG GGGTACAAAA ATTTACCCGA GCTAAGCTTA GAGAAATTTA TATCGGCTAC TCATTTGCAA GGTTTATTGC GAGAACCTCT TCCAGCGTAT CGCACTGGCG ATAAAGTAAA AATAAACAGC GATGGTCAAA TTGAATTTAT TGGGCGCTTA GACGACACCG TAAAAATTAG CGGTCAACTC GTAAACCCTC TGGAATTAGA AAACGTACTG TTAAATCACC CTGCAATAAA TCAAGTTGCT GTGGCTGTGG ATAAATCTGA GCTGCGAGTG ACTTTATATG CATTTGTAGT GTTGGGTGAA AATGCAATAG AACATTTAGC CCACAAGCAA TTGCGCGATT ATATTCGCGA TAACCTGCCC GCTGTAATGA TGCCAAGTAG AATTGAGCTG TGCGAGAGCT TGCCCAAAAC AACGGCAGGG AAAATTGATA GAAAACGCTT ATTGGCGACC GCCAGCGCTG CGCCAAAGCA ACAAAGTGAC ATGCAAAGCG ATGCGTGCCT AAGTGAGACG AGCTTAAATA GCTATCAGCG CTTAAATAGG TATCAACTAG CGGTGCTAAG CGTCTGGCGT AACGTATTGG GTCGGTCTGA TATTGCGCTG CACGACGATT TCTTTGAGCT TGGCGGCCAA TCTTTGCAAG TGTTGCAAAT CGCCAATCGT TTGACCAAAC AGTTAAGCGG TGTGATTACA TCACCTTTAC CGGCAGATAT GTTGTTTAGG CATTCCGTGG CGAATGAGTT GGCAAATGCG ATTGCACAGT TAGACGCTAG CGATACGGCG ATTAACGCTA AGCCTGTTGG TAACGAAATG CCCCAAGATG TGCGTGAAGA TATTGCGTTA AGCGATGCCC ATTTAAGTGA AATTAACCGC GCGATAGCGA CTATTACAAA TTCTAACACT AGTAGCAATA AAAATATTTT TCTTACCGGC GCTACAGGCT TCGTCGGTGC GCAATTGTTA AATACGCTAC TGGCTGAAAG TGATGGCAAA ATATTTTGTT TGTTAAGAGC CGATTCACAA GAGCAAGCCC AGCGTAAGCT TGTTGATGCA ATGCTAAAAC AAGATTGTTG GCGCAGCGAT TATGCTTCGC GTGTTATTCC AGTGTTAGGT GACTTAGAAA AAACAGATTT TGGTTTGCCT CAATCAGTAC TGCGTGAGAT AACACAATCG GTTAGCTGTG TTATACATAA TGCTGCCAAC ACCAGTGTTG TGCGCGATTA CAACGCAATG CGTAAAGCGA ATACGCTAAG TACTAAGCAG GCATTATTAT TAGCGGTACG GGCTAAAGCG AGTTTTCATT TGGTATCCAC TGTCGCCGTA CTCGATTTTT CATCACCAAA TAAAACAGCC GACGAGCAAC AAGAAGAGGC CGTTGCTTGG CATCAAGGGT TGCGCGACGG TTACCAGCAA AGTAAATGGG CGGCAGAGGC TATTGTGACG CATGCGCAAC AAATCGGCTA CCCGGCAGCA ATTTATCGGT TGGGGCGAGT GGTTGGTGAA CCGCGCACAG GCTATGTAAA TGCAAACGAT TTGGCATGGT TAATTATTGC GGCTAGCGTG CGCTTAGGTG CCTTTCCAAT TTTAGACGTA AGCGAACCTT GGACAAGCGT AGATAATGTA GCACGGGTAA TCGCCCGTGC CAGTTTACAG CGCAAGCCAA TTGAGCCAAT CGTGCACATT ACACCAAACA ACCCGCAATC TTTCGCACAA TTATTTAAGC GACTAAAGGA CTTTGGCTAT TTGTTGCCTA GCGTAACCAT GCCTGAGTGG CTAAGTAGGC TGGCTGAAAG TAAGCACCCA GCGGATAACG CATTGCTGGC CTTTTTTACT ATGCAGCAGC CGTCGGCCGT AAAAGGCGGC GCAAGCGGTA TAACAAATAG AAATTGTAAA AACTTAGTAT CGCAATTGAG CTTAGATGAA TCACTGTTAA GTAACGAAAA AGTGGATAGT AACTTTGCGA AGTATATTTC CTTTGCACAA AGTACTGGCA TTATCTCCAA GCCAACAGCA GAGCGCGTAC GCGTTTCTAC AGTAGCACCC TCTGTAACCG TGCATATTGA AAACACAGCA GTCGATGACG GAGCCAGCTA TGGAGTCTAA
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Protein sequence | MSYRENQNSV YSASELPQAI RTVIIGGEAV QPAKLALWHK TKGQSRAVLL NTYGPSEATV VATVAALNTN DVHIGTPLAG RAVAVVNGEG RCVVRGGEGE LWLLGAGLGL GYKNLPELSL EKFISATHLQ GLLREPLPAY RTGDKVKINS DGQIEFIGRL DDTVKISGQL VNPLELENVL LNHPAINQVA VAVDKSELRV TLYAFVVLGE NAIEHLAHKQ LRDYIRDNLP AVMMPSRIEL CESLPKTTAG KIDRKRLLAT ASAAPKQQSD MQSDACLSET SLNSYQRLNR YQLAVLSVWR NVLGRSDIAL HDDFFELGGQ SLQVLQIANR LTKQLSGVIT SPLPADMLFR HSVANELANA IAQLDASDTA INAKPVGNEM PQDVREDIAL SDAHLSEINR AIATITNSNT SSNKNIFLTG ATGFVGAQLL NTLLAESDGK IFCLLRADSQ EQAQRKLVDA MLKQDCWRSD YASRVIPVLG DLEKTDFGLP QSVLREITQS VSCVIHNAAN TSVVRDYNAM RKANTLSTKQ ALLLAVRAKA SFHLVSTVAV LDFSSPNKTA DEQQEEAVAW HQGLRDGYQQ SKWAAEAIVT HAQQIGYPAA IYRLGRVVGE PRTGYVNAND LAWLIIAASV RLGAFPILDV SEPWTSVDNV ARVIARASLQ RKPIEPIVHI TPNNPQSFAQ LFKRLKDFGY LLPSVTMPEW LSRLAESKHP ADNALLAFFT MQQPSAVKGG ASGITNRNCK NLVSQLSLDE SLLSNEKVDS NFAKYISFAQ STGIISKPTA ERVRVSTVAP SVTVHIENTA VDDGASYGV
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