Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3307 |
Symbol | |
ID | 3965818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4218144 |
End bp | 4218611 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637922404 |
Product | rod shape-determining protein RodA |
Protein accession | YP_528774 |
Protein GI | 90022947 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.460384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.047628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATCCA ATTTACGTAA TACACTTCTA AAATGCACCG CCGCCGTGCT TTTGTGCACC ACATATGGGC AAGCAATAGC CCTAGAGCCT AGTAAAGCCG CCACCAATGC TGAAGTATTT TTTATTGAGC CCAAGAACGG CGCAGAGATA ACAGGCCCGG TCACCATTAA GTTCGGCATT AAAAACATGA CGGTTATCCC AGCTGGCGTA CAGCACCCTT ACTCCGGCCA CCACCATTTG CTTATCGACG TAGACAAGCT ACCAGACCTT AAAAGCCCCA TTCCCGCAGA CGCTAATCAC CGTCACTTTG GCAAAGGCCA AACCGAAGCA ACACTCGAGC TTGAGCCAGG TGAGCACACG TTACAATTGC TGCTTGGCGA TCATTTCCAC ATCCCGCACG ACAAGCCCGT GCTATCGGAA AAAATCACCA TTACAGTAAA AGCAAAGCCC GCCGCAGCGG CAAAATAA
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Protein sequence | MLSNLRNTLL KCTAAVLLCT TYGQAIALEP SKAATNAEVF FIEPKNGAEI TGPVTIKFGI KNMTVIPAGV QHPYSGHHHL LIDVDKLPDL KSPIPADANH RHFGKGQTEA TLELEPGEHT LQLLLGDHFH IPHDKPVLSE KITITVKAKP AAAAK
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