| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3275 |
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| Symbol | |
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| ID | 3965767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4181715 |
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| End bp | 4184393 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922372 |
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| Product | leucyl-tRNA synthetase class Ia |
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| Protein accession | YP_528742 |
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| Protein GI | 90022915 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00291513 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0104078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AATCATTAGT GGCCCTATTC CTATTGGGCC TGCTTACTGC TTGTGGGGGC
GGTAGTTCAA ATCCAGACCC AGACCCAGAC CCGATTGAAG AACCTGAAGG CGAACCTGAA
GGAGAGCCAG AAGGAGAGCC TGAAGGAGAA CCAGAAGGAG AGCCAGAAGG AGAGCCAGAA
GGGGAACCAG AAGGAGAGCC AGAGGGTGAA CCTCAGGAGT CTAACTTTCC GCGTGGTTCA
CTCGGTGATA ACGACACTGT GCCAGACGTG GTATGTACGC AAACCGTAAA CAGTACGTCA
GAACTAGAAG ACGCTGTAAG CTACGAGATG ACCCCAGGTA CAACGCTGTG TTTGGCTGAC
GGCAACTACA CCAACTTAGA AATTCAGTTC GGTGGTATTG GTACCGAAGC GAACCCTATT
ACTGTGGCAG CAGCTAACCC CGGTATGGTT ACAATTGGCG GCGAAGTTGG GATCCGCATG
AGCGGTGAAT ACGTTGTGTT GCAAGGGCTT ATTTTTAAAG ACGGTGAGAG CGCGAGTAGC
GACTTAATTC AAACTCGCGG CAACTCTAAC GCGCCTTGTA ATAACTGCCG TATTACCGAA
ATTGCCATTA TCGATTTCGA TCAAAATTCC GATAGCAGCG GCAAATGGGT TCACATCTAC
GGTGCACATA ACCGCGTAGA CCACAGCTGG TTTTCTGGCA AAACTACCCG CGGCGCATTA
CTTGTTGTAG ATCGTTACAT TGAAGATGGT GTTGACCCAC TCGATGCCGA AATAGATTAC
GCGCAAATCG ATCACAACTA CTTCGGCGAC CGTCCACCGG TGGATGGCAA AGCTTACGCG
AGTAGCGGCG ACAACGAATA CGAAGGTATT CGCATTGGTA CCAGTGATTC GCACACAGGT
GATTCGTTCT CGGTAATCGA GCACAACTAT TTTGAGCGCA TACAAGGCGA AGCCGAAGTT
ATTTCTAATA AGTCTGGCAA CAACCGCATA GAGCACAATA CTGTACGTAA CAGCTATGGT
TCTATTACTA CACGTCACGG CTCAAGCGCG ACTATTACCA ATAACTTTAT TATTGGCGAT
GGTCACCCAT ATGCAGGCGG CCTGCGCATT ATTGATGACG GCCACACCGT AACGAACAAC
TACATCCAAG GTGCGCGTTA TTTAGCAACT ACTCACCATG GCGGTATTGT GTTGATGGGC
TCCGATGGTT CAACCACCAA CGGTTACCAG CAATTAACCA ATGTACTTGT TGCGCACAAC
ACTGTGGTAG ATAGCGTGAA CAGCTTGAAC GTAGATGGCG GCCAAAAGTC TACCAACCCC
AATAATGTTT ACCTAGTGAA TAACATTATT GCTAATGGCA TAGGCCCTGT TATTACAGAA
GCTGCAGATG GTATGCCTGG TAGCTCTGTG ATTGCGGGCA ACATTTTTTA CGGCCAAAGC
TTTTCCGACT CCTCTAGCCT TACCTCTGTA GACGGTATTA CTTGGTTAGA CGTTGCGTTC
GCAGCAGATA TGCAAGGCGT AATGCGCGCT ACAGGCAGCA GCCCAGACTT AACCGCGGCA
GCTGCAGATA CTGGCGATTT TGCCGCCGTT ACTTTGGATA TGGATGGCTT GGCGCGTGCA
GCAACCACAC AAGCTGGTGC TGACGACGAT ATAGGTGGCA ACCCAGTTCG CGGCATTCTT
AATAGCTACG ATGTTGGCCC AATAAGCTAC CGCCCACCAA TGACCACCCC ACACGTTGCA
GAAGTGGATG TCGCCAACTA TGCGTTTGAT GAAGGTGCAG CAGGTTGGAC TTTAGTTGAT
GCAGTGGTAA ACACTAACGC TGCAGAGGTT TTTGCCCGCG GTGCAAGCGT GGAAGTAACC
GGTGCTAACG GCCGCGCTTC GCAAGTTGTT AGCTTAACGG CGAATACCAA CTACACCTTA
ACTGCGTTTG TTAAAGGCAC TGCAACTCTT GCAGCAGATG TAGGTGGCAC GGTTTATCGT
TCAGATGTGA ACTCTTCATT GGAGTACAAA CTAGCAACCG TAAGCTTTAA TTCTGGTGAT
GCAACATCAG CCACCATTTA CGGCGAAGTT GATGATTTTG TACTTAACTA TGCCCCAATT
GGCGAAGCGA GCTTAGACGG CTTCCCTGGC GCAGACACCA CCTTTTGGAG TGTGTACGAG
GGAGCAGGTA TCGGTCAGGT TCAAGGCTCT GATAACTCAG CAGCCGGCGC TGATGGGTCT
GTTAAGTTTA AATTAGAAGA CGCTACAGAA GTGGGTACCC CGCGTATAAG CCAAGTATTA
ACCGGCCTAG AATTAAATAC GGACTATACT TTATCTATGT ACGCCCTTTA CAAAAAGTCT
GCCGATGTGA CTGTAACTAT GGGGGCGTTT GTTGGCGAAA CAGACACTGT ACTAGCAAGC
AAAGTGGTTG ATTTTGAAGA CCTTGTTGCA GCTAATGCGC CGAAAGGCGA CGACAGTTTC
CGTCAAGACA CACTAACGTT TAACACGGGT AGTAACTCAA CTATTACTAT CTTTGCTGAA
TACAACGCCA ACACAATTAT TGCTGACGGC GGCGACGCTG GTGATACGGA GTTTCGTGTA
GATGAATTTG CATTGACATA TGAAGGTGCA CCTGCTGCGG ATGCCAAAGC ATACTTTGAC
GAATTCCGTC TAGTATCGCA TGCATCGCTA GCAGACTAA
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| Protein sequence | MKFKSLVALF LLGLLTACGG GSSNPDPDPD PIEEPEGEPE GEPEGEPEGE PEGEPEGEPE
GEPEGEPEGE PQESNFPRGS LGDNDTVPDV VCTQTVNSTS ELEDAVSYEM TPGTTLCLAD
GNYTNLEIQF GGIGTEANPI TVAAANPGMV TIGGEVGIRM SGEYVVLQGL IFKDGESASS
DLIQTRGNSN APCNNCRITE IAIIDFDQNS DSSGKWVHIY GAHNRVDHSW FSGKTTRGAL
LVVDRYIEDG VDPLDAEIDY AQIDHNYFGD RPPVDGKAYA SSGDNEYEGI RIGTSDSHTG
DSFSVIEHNY FERIQGEAEV ISNKSGNNRI EHNTVRNSYG SITTRHGSSA TITNNFIIGD
GHPYAGGLRI IDDGHTVTNN YIQGARYLAT THHGGIVLMG SDGSTTNGYQ QLTNVLVAHN
TVVDSVNSLN VDGGQKSTNP NNVYLVNNII ANGIGPVITE AADGMPGSSV IAGNIFYGQS
FSDSSSLTSV DGITWLDVAF AADMQGVMRA TGSSPDLTAA AADTGDFAAV TLDMDGLARA
ATTQAGADDD IGGNPVRGIL NSYDVGPISY RPPMTTPHVA EVDVANYAFD EGAAGWTLVD
AVVNTNAAEV FARGASVEVT GANGRASQVV SLTANTNYTL TAFVKGTATL AADVGGTVYR
SDVNSSLEYK LATVSFNSGD ATSATIYGEV DDFVLNYAPI GEASLDGFPG ADTTFWSVYE
GAGIGQVQGS DNSAAGADGS VKFKLEDATE VGTPRISQVL TGLELNTDYT LSMYALYKKS
ADVTVTMGAF VGETDTVLAS KVVDFEDLVA ANAPKGDDSF RQDTLTFNTG SNSTITIFAE
YNANTIIADG GDAGDTEFRV DEFALTYEGA PAADAKAYFD EFRLVSHASL AD
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