Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3160 |
Symbol | |
ID | 3965594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4036541 |
End bp | 4037176 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637922257 |
Product | glutamyl-tRNA(Gln) amidotransferase C subunit |
Protein accession | YP_528629 |
Protein GI | 90022802 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.571951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGTTG TAACCAAACG CTCATCTATG ACTTATTTTT CTGATCCACG CGATCATTAC AGTCACAGAG TAAGAATAGT ACTTGCAGAA AAGGGCGTAT CGGTAGACTT AGTCGATGTT AATCCAAGCA ATATTCCTGC AGATCTTAGT GAGGTTAATC CGTATAACTC ACTGCCAACT TTGGTAGATC GCGAGTTAAC ATTATTTGAA ACACGCGTAA TGATGGAATA CTTGGATGAG CGTTTTCCGC ATCCGCCGCT ATTACCTGTG TACCCTGTTG CACGTGCTGA AAGCCGTCAA TTTATTTATC GTATAGAAAA CGACTGGTGT CCATTAGTTA ACAAATTAAT GAGCGGTTCC AAAGATGCTG CGGCTGCTGC GAAAGACTTA AAAGAAAGTC TAACCACTAT TGCTCCAATT TTTGCCGACA AGCCGTTTTT TATGAGCGAT GAGTTTTCGT TGGTAGATTG CTGTTTGGCT CCCATCCTGT GGCGTTTGAA CTACATGGGT GTGAAGCTTC CTCGAACTCG TCAAACCATG CCTTTGTTTG ATTACATGGA GCGAATTTTT GCCCGTGAAT CATTCCAAGA AAGTTTGACT GAATTAGAGC GCGATATGGG TTTAGAGCAG CCTTAA
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Protein sequence | MGVVTKRSSM TYFSDPRDHY SHRVRIVLAE KGVSVDLVDV NPSNIPADLS EVNPYNSLPT LVDRELTLFE TRVMMEYLDE RFPHPPLLPV YPVARAESRQ FIYRIENDWC PLVNKLMSGS KDAAAAAKDL KESLTTIAPI FADKPFFMSD EFSLVDCCLA PILWRLNYMG VKLPRTRQTM PLFDYMERIF ARESFQESLT ELERDMGLEQ P
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