Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3038 |
Symbol | |
ID | 3967702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3884170 |
End bp | 3885501 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637922135 |
Product | multiple antibiotic resistance (MarC)-related proteins |
Protein accession | YP_528507 |
Protein GI | 90022680 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000693301 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAACG AACTAACTCA AAGCGCAGCC CCCGCTGCAC GTGCACCTAG CACGCTGATA CCAATGATAA TAATTGGTAC ACTTTTTTTT GTTTTCGGCT TTGTTACGTG GCTTAACGGC TCGCTCATTC CTTTTTTAAA AATAGTGTGT GAGCTAACAG AGTTTCAGGC TCTATTCGTT ACCTTTGCCT TTTATATTGC CTATACCTTT ATGGCTGTGC CTTCTGCACT TGTGCTAAAG CGTACAGGCT ATAAAAACGG TATGGTTGTT GGCCTTGGCG TAATGGCGGT AGGCGCACTT ATTTTTATAC CTGCGGCACA ATTACAAAAC TACATGGTAT TTTTAGTTGC GCTATTTTTA CTCGGTGCGG GTTTAACGCT ACTGCAAACC GCTGCCAACC CATACATTGT ATGTATTGGC CCGCGCGAAA GTGCTGCTAC CCGTATTAGT GTAATGGGCT TAATTAACAA AGGTGCTGGC ATAGTTGTGC CAGTGGTATT TACCACCCTT ATACTTACCG GTATGGATCA ATTCGAGCCA GAAGTGCTTG CGGCACTCAC TGCAGAAGAA CGTGCAGCCC GCCTAGCAGA GCTCTCTTCT CGTTTGGTAA CGCCCTATAT CTATATGGCT GTGGTGCTAC TAGGCTTAGG CGCTTTTGTT AAATTTTCTC CACTGCAAGA GCTAGAATTT GAAGACAACG ATTCGCCCGC AGTAGAAAAA GAGTCGGATA TTCTTAAATA CCCTCAAGTT GTACTCGGTG CAATTGCGTT GTTTACATAT GTAGGCGTAG AAGTAATCGC CGGAGACACC ATTGGTTTAT ATGGCCAAAC AATTGGCGTA AAACATTTTG GCTCGCTCAC CTCTTACACT ATGGCCTTTA TGGTTATTGG TTACGTACTT GGTGTTGTGT GTATACCTAA ATATCTAAGC CAAGAGAAAG CGCTATTAGG TTCCGCTGTA TTCGGTATGT TATTTGTTGC TGGCGTAATG CTTTCATCGC AAGAAAGCAC ACTCATTTCT AGTATTTTAT TCGGCTGGGC AGGTATTCCT GTAGTACCAG ATACCATTAC TTTTCTAGCG TTATTAGGTT TAGCGAATGC ACTGGTTTGG CCCGCCATAT GGCCGCTAGC CTTACAAGAC CTAGGTAAAT TTACAGCTGT TGGCTCTGCA CTATTAATTA TGGGTATTGC AGGTGGGGCT ATTATTCCAT TAGCTTACGG GCATTTCGCC GAAGGCGGTA ACGGCCAATC TGCATACTGG GTAATGATTC CCTGCTATGT GTTTATTCTT TTTTACGCAC TCAAAGGCCA CAAAATGCGT AGCTGGAAAT GA
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Protein sequence | MNNELTQSAA PAARAPSTLI PMIIIGTLFF VFGFVTWLNG SLIPFLKIVC ELTEFQALFV TFAFYIAYTF MAVPSALVLK RTGYKNGMVV GLGVMAVGAL IFIPAAQLQN YMVFLVALFL LGAGLTLLQT AANPYIVCIG PRESAATRIS VMGLINKGAG IVVPVVFTTL ILTGMDQFEP EVLAALTAEE RAARLAELSS RLVTPYIYMA VVLLGLGAFV KFSPLQELEF EDNDSPAVEK ESDILKYPQV VLGAIALFTY VGVEVIAGDT IGLYGQTIGV KHFGSLTSYT MAFMVIGYVL GVVCIPKYLS QEKALLGSAV FGMLFVAGVM LSSQESTLIS SILFGWAGIP VVPDTITFLA LLGLANALVW PAIWPLALQD LGKFTAVGSA LLIMGIAGGA IIPLAYGHFA EGGNGQSAYW VMIPCYVFIL FYALKGHKMR SWK
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