| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3028 |
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| Symbol | |
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| ID | 3967692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3867979 |
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| End bp | 3868557 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922125 |
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| Product | periplasmic protein-like |
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| Protein accession | YP_528497 |
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| Protein GI | 90022670 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3656] Predicted periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.348449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000146857 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGTTT GCAGTAAAAA TAGTCTGCAG GGTATTGCAG TAAACCTGCG TAATAGTTGG
CTTGGATTAA TGGCTGCGTT TGTACTTTCT GTGTTTTTTT CTGGGCAAGT ATTTGCCGAT
AAGAACGTAG CTAGTGCAAA TGCGAAAAGC AGTGTAGTGG TTACGCTCAC CGTGCCCAAA
TTAGATGTAG ACCCCTACCA CAAACCTTAT ATTGCTGTTT GGGTAGAAAC CTCCTCGCGC
GAAGGCATTA TTACTTTAGC CGTGTGGCAC GAAAAAGACA CTTGGCTTAA AGATATTCGC
CAATGGTGGC GCAAGCTAGG CCGTGCCTCA GACGAAAACT TAGATGGCGT TTCGGGTGCT
ACGCGCAAGC CCGGTACTTA CACTGTTGAG TGGGATGGTA AAGATCAGCA GGGTAACCCT
TTGCCAGCTG GCGAATACTT AATAAATGTG GAAGCCTCTC GCGAAGAAGG TGGGCGTAGC
TACGCGCGCG AGAACATTCA GTTGGGGCAG TCTAGTCGTC AAGTAGTGGC TGCAGATAAT
GAACTCGGTG AAATTATTAT TGAGGTAAAT GCGCAATGA
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| Protein sequence | MNVCSKNSLQ GIAVNLRNSW LGLMAAFVLS VFFSGQVFAD KNVASANAKS SVVVTLTVPK
LDVDPYHKPY IAVWVETSSR EGIITLAVWH EKDTWLKDIR QWWRKLGRAS DENLDGVSGA
TRKPGTYTVE WDGKDQQGNP LPAGEYLINV EASREEGGRS YARENIQLGQ SSRQVVAADN
ELGEIIIEVN AQ
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