Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2988 |
Symbol | |
ID | 3967749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3796991 |
End bp | 3798115 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922085 |
Product | alpha/beta fold family hydrolase-like protein |
Protein accession | YP_528457 |
Protein GI | 90022630 |
COG category | [R] General function prediction only |
COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000107918 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA TGATGAAATA TTTCACCCCG TTCTGCTTTG CATTATGCGG GCTGGGTATG CATGCAACTG CGGACACAGC CGTACCGGCA TTTGAAGAAA CGGCAGACTT TATTTACCCC GGCGCCAAAG TTCACCAATA TTATTCGCAA ATTGTTGATC AGCAGTACGA AGTGCGTATT CGGTTGCCCG GCGGCTATGA GCAAAATAGC GAGGCGCAAT ACCCTGTTAT TTATGTGCTA GATGGTCAGT GGCACTTTAC GTCGAGTGCA GATGTATTGG GTAACCTCAC ATATGATGGG CAAACGCCTA ACAGTATTAT TGCTGCCATT ACTTGGTCTG GCGAAGGGGC GGTGCCAGAG CAGCTAAGGT TTCGTGATTT CACCTATACG CCAGCCCCAA ACCAACCATT AAGCGGTGGC GCGAGCTTAT TTTTAGAGGC GTTAGAGTCT GAAATTATTC CGTTTGTGGA AACAAAATAC AGAGCGAATA GTCACCGCAC GCTTATTGGC AGCTCACTAG GCGGTTTATT TGCAACCATT GCGCTTTTAG AAAAGCCGGA ATTGTTTGAC GGCTATATCG CGCTCTCTGC CCCTTATATT GCCGAGCAAA CGTATTTTCA AGCCAAGCTT GCCGAGCTAA ACGGTAGTAA AGCGCTAAAA GGTAAGCGCC TATTTTTAGG TGTGGGCGGT TTAGAGTTTA ATAAACCATT GGTCACGGAC TTCTCCAATC AGCTTAAAGA TGCGAACTTA AAAGGGCTGC GTATTAAAAC GAAAGTTGTT CCCCACGTTG GTCACGGTGG AATTAATGCG CCTGGGTTTA CCTACGGCTT ACAGCATGTA TTTAAACGCC CGCGCCTAAA ATTGGATGAT GCGATTGTTG CTAATTACGC TGGCAGCTAT ACCATTCATC CAAGTATTCC GCCCATTGTT ATATCTTTCG AAAGCAAAAA GCTAATGCTT AGCCAGGTGG GCGCTCCAAC GCTGAGTTTT TTCGCAAGTT CAGAAACAGA ATTTTATTAT GAGGGTGCGA ATATTAACTT AACTTTTATT GAGCAAGTTG AAGGGCCAAT GATTATGGCT GTAAGCCAAG AGGGGCAGGT GTTCGAATTG TTGAAGGATC AATAA
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Protein sequence | MKKMMKYFTP FCFALCGLGM HATADTAVPA FEETADFIYP GAKVHQYYSQ IVDQQYEVRI RLPGGYEQNS EAQYPVIYVL DGQWHFTSSA DVLGNLTYDG QTPNSIIAAI TWSGEGAVPE QLRFRDFTYT PAPNQPLSGG ASLFLEALES EIIPFVETKY RANSHRTLIG SSLGGLFATI ALLEKPELFD GYIALSAPYI AEQTYFQAKL AELNGSKALK GKRLFLGVGG LEFNKPLVTD FSNQLKDANL KGLRIKTKVV PHVGHGGINA PGFTYGLQHV FKRPRLKLDD AIVANYAGSY TIHPSIPPIV ISFESKKLML SQVGAPTLSF FASSETEFYY EGANINLTFI EQVEGPMIMA VSQEGQVFEL LKDQ
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