| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2870 |
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| Symbol | |
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| ID | 3968096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3631790 |
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| End bp | 3633067 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921967 |
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| Product | putative transcriptional regulator, CadC |
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| Protein accession | YP_528339 |
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| Protein GI | 90022512 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.806107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC ACTTTAACGA TGTTGAAATA GATACGAAGC AATACCGCAT CACTTGCGCG
GGTCTCACCG TATCAGTAGA GCCCAAAGTA TTTGATATCA TTGTCTACCT CATCGAAAAC
CGAAACAGAC TGGTTTCGCG CGATGAACTC TTTGAAAAGA TATGGGATGC GCGTGCGGTA
TCCGACACCA CGCTAAGCAA CCACATTAAA AGCGCCCGCA AAGCATTAGG GGATGACGGG
GAACAACAAC ACACCATTAA AACCGTTCGC GGGCGCGGCT ATCAGTTTAT TGCTGAAGTA
TCGGTTTCCG CTTTAACTGA CGAGCCAATT GCAGCTTCAA GTAGTGCGCC AAGCGAGCGG
AGCGCACCAG TACAAAGCAC TAATCGCTTC CAGCCTAAAG CCACCATTGC ATTTTTAATA
TTTGGTTGCT TATGTGTACT CACACTTATA GGTTATTTGT ATAACCTCAG CCGCACGATA
GAACCACAAC AGCCTAACCT TTCCCCTCTA AATCCCACAC TAAGCCCCCC GTTACACGCA
CAAAATACAA CCATACCCTA CATTCTGGTT GTTCCTTTTT CAGTATCCAG TGGGGAACAA
TCTAAATGGG AGCCCTTTGC CGACCAAACT ACGCGCGAAC TGATTCAATA TTTAAGAAAA
ATATCCGGTA TTCGCGTAGT GCCACCCCCA TCTTCATTCA CATTTAAAAC CAATAAGGTG
CGCGCACACA TTACTAACCA ACTGCCTGAG GTAAATTACA TTATTGATGG TGTGGTAAAA
GAGGATGGCA ATGGCAATTT TCGCATTAGC GTGGAGCTAG AAAACATAAC CGACAATACC
TTAGTGTGGA GCAACAACTA CGACATAAAG GTAAACGAGA ATAACCAATT TAAAGTGCAA
GCAGAAATTG CTGCATCGGT TACGGCATCT CTTCAGGTCG AAGTATTAGA AGCCGAAAGG
CGCACCTTAG CACAGGTACC AACCTCTAGC GTAACGGCCT ACGAGCTGTA CGTTCAAGGT
CAGTATCAAT TAGGCGCAAT GACCCATACC TCTGTTTTGC AAGCTATTAC ATTATTCAGC
GATGCAATCG AAATAGACCC CAATTTTGAA GAGGCATATA TTGCCAAATC GGATGCCTTC
CGCACAATTA TGACGTGGTT CGCCAAACCT AAAGATTTAC TACCCAAAGT AATCACATCC
AGCATTGATG TTATTGATAT CAACCCAAAC TCAGCGCGTG CGCACTCTTC ACTTGGCTTA
GCCTATGTGC ACGCTTGA
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| Protein sequence | MSFHFNDVEI DTKQYRITCA GLTVSVEPKV FDIIVYLIEN RNRLVSRDEL FEKIWDARAV
SDTTLSNHIK SARKALGDDG EQQHTIKTVR GRGYQFIAEV SVSALTDEPI AASSSAPSER
SAPVQSTNRF QPKATIAFLI FGCLCVLTLI GYLYNLSRTI EPQQPNLSPL NPTLSPPLHA
QNTTIPYILV VPFSVSSGEQ SKWEPFADQT TRELIQYLRK ISGIRVVPPP SSFTFKTNKV
RAHITNQLPE VNYIIDGVVK EDGNGNFRIS VELENITDNT LVWSNNYDIK VNENNQFKVQ
AEIAASVTAS LQVEVLEAER RTLAQVPTSS VTAYELYVQG QYQLGAMTHT SVLQAITLFS
DAIEIDPNFE EAYIAKSDAF RTIMTWFAKP KDLLPKVITS SIDVIDINPN SARAHSSLGL
AYVHA
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