Gene Sde_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2854 
Symbol 
ID3968119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3609829 
End bp3610296 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content48% 
IMG OID637921951 
Productputative oxidoreductase 
Protein accessionYP_528323 
Protein GI90022496 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGAAC TTACCATTAA TCAAAAAAAA CACTCTTTAG ATGCAGACCC TAATATGCCG 
CTGCTTTATG CATTGCGCGA TATTGCCCAA TTAACCGGTA CAAAGTTTGG CTGTGGGCTG
GGGCAGTGTG GAGCTTGCAC TGTACATGTA GATGGCACGC CAGTGCGCAG TTGTTTAACA
CCGCTCGCGG CAGTAACAGG TAAGGCTATT ACCACAATAG AAGGGTTGGC CAGTGGCGAG
GGCTTGCACC CCTTACAACA AGCATGGGTG GATAATAATG TTCCTCAGTG CGGGTATTGT
CAGGCTGGGC AATTAATGAG TGCTGCGGCC CTGCTTAAGC AAAAACCATC CCCTACCGAT
AAAGATATAG ACACCTATAT GCAAGGCAAT ATTTGCCGCT GTGGTACTTA CCCGCGTATT
AAAAAAGCGA TTAAGCAAGC CGCTGTGCAA ATGCAGGAGG TGAAGTAA
 
Protein sequence
MLELTINQKK HSLDADPNMP LLYALRDIAQ LTGTKFGCGL GQCGACTVHV DGTPVRSCLT 
PLAAVTGKAI TTIEGLASGE GLHPLQQAWV DNNVPQCGYC QAGQLMSAAA LLKQKPSPTD
KDIDTYMQGN ICRCGTYPRI KKAIKQAAVQ MQEVK