Gene Sde_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2850 
Symbol 
ID3968115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3603785 
End bp3604711 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID637921947 
Productputative lipase/esterase 
Protein accessionYP_528319 
Protein GI90022492 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTGA AGCGACTTGT TATAAAGGCC GAACTTTTAA TACGTTTCTG TGGCTTTGTA 
AGTGTTTTGT TGTTTGCTAG TTTTGCTTGC GCCAATAAAA ACGATAGCAC TGGTACAGTA
AAGTTATATA GCGATGTGCC TGTGGGAAAA GTAGGGGAGG TGACGCTTAC TATTGATATC
GCTTCGGCGC ATACGGCAGG TAATGCAGCC AGGCCAGCAC TAGTGATTAT TCACGGTGGC
GCTTGGCGAC GGGGCTCCAA GGAAAGTAAG CGAAAATCCA TAGAAGGCTA CGCACGCAAG
GGCTTTGTTG GGGCGGCACT AATGTATCGC TTTGCGCCTG ATTACACTTT TCCCGCGCAG
GTCGAGGATG TAAAAGCGGC AATTCGTTTT TTAAAAGCGA ATGCTGCAAC TTATGGCATA
GACCCTAATC GTATAATTGT TTTAGGTACA TCCGCTGGCG CGCATCTAGC TGCAATGCTG
GCGGTAACGG GCAATAACGA CCCGTTTGCA ACACATGGCC TTTGGGAGAG TGAAAGCGCG
TCTATTTTTG CCGCTATATT ACTTGCTGGC CCACTTGCGG AGTTTGAGCA CCCAAGTTAT
CGAAACAATC AAAGCCTTGC TATGTTTTTG GGGGCTAAAC CTAGCGATGC CCCAGAACTG
GCTGCGGCAG CTATGCCCAT AACCTATGCG GATGAAACAG ATTCACCAAT GTTTATTGCC
CACGGCGATG CAGATACTGT GGTGAATGTG CAAGCCAGTA GGGTGTTTGC AAGCGCGCTA
GCCAAGGAAA AGGTGAGGTA TGAATACCGC GAGCTGGCCG GGGCCGGCCA TGCAATTGCA
AAAACGCACC CCGATATTTA TAAGCAAGCA CTGCAGTTTA TTAAACAATT AATAGCGGAA
GCGAATAAAA AGCAGGCTGG GAAATAG
 
Protein sequence
MFLKRLVIKA ELLIRFCGFV SVLLFASFAC ANKNDSTGTV KLYSDVPVGK VGEVTLTIDI 
ASAHTAGNAA RPALVIIHGG AWRRGSKESK RKSIEGYARK GFVGAALMYR FAPDYTFPAQ
VEDVKAAIRF LKANAATYGI DPNRIIVLGT SAGAHLAAML AVTGNNDPFA THGLWESESA
SIFAAILLAG PLAEFEHPSY RNNQSLAMFL GAKPSDAPEL AAAAMPITYA DETDSPMFIA
HGDADTVVNV QASRVFASAL AKEKVRYEYR ELAGAGHAIA KTHPDIYKQA LQFIKQLIAE
ANKKQAGK