| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2781 |
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| Symbol | |
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| ID | 3968338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3514112 |
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| End bp | 3514732 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921880 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_528252 |
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| Protein GI | 90022425 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000487748 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCCATA CAGAAAGCCA TAAACGTAAC TTACGCCGCA AAGAGGCGCG ACCAGACGAA
ATCGTAGATT CAGCCATGAA ACTTTGGGCA AACCAAGGCT TCACCGCCAC TAAAATCGAA
GACATTGCCA AGGGTGCGGG TGTCGCAAAA GGTACCGTTT ATCTCTATTT TGAGTCGAAA
GAGGCCATTT TTGAGGCAGC CGTAAAGATC CGGTTGGCGG GCACCATGAC GCAGATTGAT
GAGACCAGCA AAGATGAGTC GTTAAGCACT AGGGACTTGC TAAAGAACTT CTACTGGAGG
GTATACCAGC AACTTTTCGT GAACGGATCA GCAGTCCTCA TGAAGGTTCT GATTGCGGAA
GGGCATCGCT TTCCCAGCCT GGTGAATGCC TACAAATCCG TCGTTTTATC GAACGGCATA
CATTCCATTG CCAACATCCT AAGGCGCGGC GTTGCAAGAG GAGAGCTCAA CAAGTTAGCA
AACACCATTG ATAATCGCTT AGTGATGGCG CCGGTTGTCA TGTTCACGAC TTGGAGCATG
ATTACCGGAG AACAATCAAA GAGCGCCTAT ACAAAGCTCA TAGATGATCA CATTTATATA
TTGATGAAAG GTTTAGGTTG A
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| Protein sequence | MTHTESHKRN LRRKEARPDE IVDSAMKLWA NQGFTATKIE DIAKGAGVAK GTVYLYFESK
EAIFEAAVKI RLAGTMTQID ETSKDESLST RDLLKNFYWR VYQQLFVNGS AVLMKVLIAE
GHRFPSLVNA YKSVVLSNGI HSIANILRRG VARGELNKLA NTIDNRLVMA PVVMFTTWSM
ITGEQSKSAY TKLIDDHIYI LMKGLG
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