Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2771 |
Symbol | |
ID | 3968328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3503976 |
End bp | 3504452 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921871 |
Product | hypothetical protein |
Protein accession | YP_528243 |
Protein GI | 90022416 |
COG category | [R] General function prediction only |
COG ID | [COG0645] Predicted kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00380494 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTAGTGC TGTTATGTGG AAAAATGGGG GCAGGTAAAT CGACGAAAGC GATCGAGTTG GCCAAGGAGC GAAATGCGGT TTTGATATCG GAAGATCACT GGCTCAGTGC TTTATTTCCG GACCAAATTT TCCGCATTGA AGATTATGTG CGCCTTTCTA ATTTGATAAA GCCATTAGTT AAGTCATTGG TGCAGGGCAT TCTAAAGTCT GGCGCAAACG TAGTTATGGA TTTTCCGGCT AATACAGTGG CGCAAAGGCA ATGGTTGAAG AGCATTTTTT CTGAAATAAA TGCCAACCAC GAGTTGATAT TTCTGAACGT GACGGACGAT GTCTGTTTGC AGCAAATTGC CAAAAGGCGT ATTGAACAGC CTGAGCGCGC CGCAACGGAT ACCGAGGACA TGTTTCTGAG GGTAACCCAA TATTTTGCAG AACCGTCTCC AGAAGAAGGA TTCCTTGTTA CTACAATTGA GAGGTGA
|
Protein sequence | MLVLLCGKMG AGKSTKAIEL AKERNAVLIS EDHWLSALFP DQIFRIEDYV RLSNLIKPLV KSLVQGILKS GANVVMDFPA NTVAQRQWLK SIFSEINANH ELIFLNVTDD VCLQQIAKRR IEQPERAATD TEDMFLRVTQ YFAEPSPEEG FLVTTIER
|
| |