Gene Sde_2765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2765 
Symbol 
ID3968361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3500334 
End bp3500711 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content43% 
IMG OID637921865 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_528237 
Protein GI90022410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.183145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00416303 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCGT TAATACTTCA CAGCAAAAAC ATAGCGCTAG CTTTTGGTTT TACATTTATT 
GCAGTTGCGC TTTTAGGTTT TGTTCCTAAT CCCTTGGTTT CTCCGCATGG CGTATTTGCG
GTGAATCTGG CTCATAATTT GGTTCATCTA CTTACAGGTG TTGCCTTTGT TGCTGGGGTT
TATCTGTTTA GAGGAAGGGA ACACAAGGTC ATACTCGTGC TAGGCGGGCT ATATTTTGCC
GTTGCAATAC TGGGTTTCTT CACCAAAGGT GACATGCTAT TGGGCATTGT GCATATTAAT
GAAGCCGACC GTTGGTTGCA TCTTGGTCTC GCGTTAGCGA TATTGGTGTC GGGTATGGTT
TTTAAATCAT CAAAGTAG
 
Protein sequence
MTALILHSKN IALAFGFTFI AVALLGFVPN PLVSPHGVFA VNLAHNLVHL LTGVAFVAGV 
YLFRGREHKV ILVLGGLYFA VAILGFFTKG DMLLGIVHIN EADRWLHLGL ALAILVSGMV
FKSSK