Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2588 |
Symbol | |
ID | 3968638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3281998 |
End bp | 3282504 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637921686 |
Product | hypothetical protein |
Protein accession | YP_528060 |
Protein GI | 90022233 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.92104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTG GCAAGATTGT AATCGCATTA TGTTTAACCG TAGTGGCTCC TTTTGCAGCT GCTGGCAAGG TTGTTGTGTT GGATCATCAA ATAGCTATGC TTGCTACCGA CTTTGCAAAA AGCCGTTTTG AAGCATTACA AGCTAACCCA GAGTTTTCTA AAGTGGTTGC ACAATACGAA ACACTAAGTG CCGACTTAAC AGCGCTTGGT AAAGAAGCAG AAACAAAAGG TATGACTTGG GGCGCAGAGC AAGTTGCTAA TCACCGCAAA AAAGAAGAGT ACATAAAAGC AGATTTGCAG TTGGCTTATC AAAAAATACA GGCAGAGCGC AAAGCGGCTA ACGAAAGTAT TATTCGTGAA TTGCAACCTA AGCTTGAAGG CGTGCTAAAC AAGCTTATCG AGTCTGAAGG TATTGATATT ATTCTTAGCA AGCAAGCGGC TTTTTACGCG AGTGAAAATG CAGATATCAC CCGTAAGGTT GTAGATGCTT TAAACAAAGC TAAATAA
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Protein sequence | MKFGKIVIAL CLTVVAPFAA AGKVVVLDHQ IAMLATDFAK SRFEALQANP EFSKVVAQYE TLSADLTALG KEAETKGMTW GAEQVANHRK KEEYIKADLQ LAYQKIQAER KAANESIIRE LQPKLEGVLN KLIESEGIDI ILSKQAAFYA SENADITRKV VDALNKAK
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